Hs05786150_cn

• Gene Symbol: GALNT2
• Assay Reference Genome Location: Chr.1:230096069 on build GRCh38
• Cytoband: 1q42.13

Target Gene Details

• Entrez Gene ID: 2590
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 2
• Gene Aliases: GalNAc-T2
• Location: Chr.1:230057789-230282130 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT2	NM_001291866.1			NP_001278795.1
	NM_004481.4			NP_004472.1
	XM_017000963.1			XP_016856452.1
	XM_017000965.1			XP_016856454.1
	AK290048.1
	AK296886.1
	AK300453.1
	AK304029.1
	BC041120.1			AAH41120.1
	BG773173.1
	X85019.1			CAA59381.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv832814	Chr.1:230003613 - 230199636 on Build GRCh38	Gain	LOC101927532 GALNT2
esv3589083	Chr.1:229939508 - 230186230 on Build GRCh38	Gain	LOC101927532 GALNT2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

immunoglobulin biosynthetic process
protein O-linked glycosylation
O-glycan processing
protein O-linked glycosylation via serine
protein O-linked glycosylation via threonine

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
protein binding
manganese ion binding
carbohydrate binding