Hs05787380_cn

• Gene Symbol: SMCP
• Assay Reference Genome Location: Chr.1:152880727 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 4184
• Gene Name: sperm mitochondria associated cysteine rich protein
• Gene Aliases: HSMCSGEN1, MCS, MCSP
• Location: Chr.1:152878322-152885047 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SMCP	NM_030663.2			NP_109588.2
	AK312020.1
	BC014593.2			AAH14593.1
	BC016744.2			AAH16744.1
	X89960.1			CAA62000.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv432n100	Chr.1:152777257 - 152889390 on Build GRCh38	Gain	LCE6A LCE1E LCE1A LCE1D LCE1B LCE1C SMCP
nsv831592	Chr.1:152842578 - 153024686 on Build GRCh38	Gain	LCE6A SPRR1A SPRR3 IVL SPRR4 SMCP LINC01527
esv2761937	Chr.1:152838707 - 152881284 on Build GRCh38	Gain	LCE6A SMCP
nsv547899	Chr.1:152699529 - 153272606 on Build GRCh38	Gain	LCE1D LCE4A SPRR2C SPRR3 LCE1B LCE1C SPRR2A KPRP SPRR2D SPRR1B LELP1 SMCP LCE1E LCE1A LCE1F IVL LOR LINC01527 SPRR2F SPRR2B LCE6A SPRR2G LOC101928009 SPRR1A SPRR2E C1orf68 SPRR4 PRR9
nsv1008447	Chr.1:152838695 - 152881272 on Build GRCh38	Gain	LCE6A SMCP
esv3587570	Chr.1:152831474 - 152882955 on Build GRCh38	Gain	LCE6A SMCP
esv2758970	Chr.1:152500363 - 152925677 on Build GRCh38	Gain+Loss	LCE1E LCE1A LCE1D LCE3E LCE3A LCE5A LCE2D LCE2C LCE2A LCE1F LCE4A IVL LCE1B LCE1C LCE3B CRCT1 LCE6A LCE3D LCE2B KPRP C1orf68 SMCP LINC00302 LCE3C

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

penetration of zona pellucida
sperm motility

Function(s)

molecular_function
protein binding