Genomic Map
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Target Gene Details
Entrez Gene ID: | 9353 |
Gene Name: | slit guidance ligand 2 |
Gene Aliases: |
SLIL3, Slit-2 |
Location: |
Chr.4:20251905-20620561 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SLIT2 | NM_001289135.2 | NP_001276064.1 | ||
| NM_001289136.2 | NP_001276065.1 | |||
| NM_004787.3 | NP_004778.1 | |||
| XM_005248211.3 | XP_005248268.1 | |||
| XM_006713986.3 | XP_006714049.1 | |||
| XM_011513909.2 | XP_011512211.1 | |||
| XM_017008845.1 | XP_016864334.1 | |||
| AB017168.1 | BAA35185.1 | |||
| AF055585.1 | AAD04309.1 | |||
| AF133270.1 | AAD25539.1 | |||
| BC117190.1 | ||||
| BC143978.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3569322 | Chr.4:20278346 - 20284610 on Build GRCh38 | Loss |
 SLIT2
|
| nsv461287 | Chr.4:20260163 - 20290616 on Build GRCh38 | Loss |
SLIT2
|
| nsv593792 | Chr.4:20273854 - 20361093 on Build GRCh38 | Loss |
SLIT2
|
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Additional Information:
For this assay, SNP(s) [rs73803852] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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