Hs06111817_cn

• Gene Symbol: SNCAIP
• Assay Reference Genome Location: Chr.5:122328901 on build GRCh38
• Cytoband: 5q23.2

Target Gene Details

• Entrez Gene ID: 9627
• Gene Name: synuclein alpha interacting protein
• Gene Aliases: SYPH1, Sph1
• Location: Chr.5:122311354-122464219 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNCAIP	NM_001242935.2			NP_001229864.1
	NM_001308100.1			NP_001295029.1
	NM_001308107.1			NP_001295036.1
	NM_001308109.1			NP_001295038.1
	NM_005460.3			NP_005451.2
	NR_131762.1
	XM_005272138.3			XP_005272195.1
	XM_005272139.1			XP_005272196.1
	XM_006714734.2			XP_006714797.1
	XM_011543737.2			XP_011542039.1
	XM_011543738.2			XP_011542040.1
	XM_011543739.1			XP_011542041.1
	XM_011543743.2			XP_011542045.1
	XM_011543745.1			XP_011542047.1
	XM_011543749.2			XP_011542051.1
	XM_017010079.1			XP_016865568.1
	XM_017010080.1			XP_016865569.1
	XM_017010081.1			XP_016865570.1
	XM_017010082.1			XP_016865571.1
	XM_017010083.1			XP_016865572.1
	XM_017010084.1			XP_016865573.1
	XM_017010085.1			XP_016865574.1
	XM_017010086.1			XP_016865575.1
	AF076929.1			AAD30362.1
	AK298882.1
	AK299687.1
	AK304646.1
	AK310835.1
	BC033743.1
	BC040552.1			AAH40552.1
	BC094759.1			AAH94759.1
	DQ227317.1			ABB51162.1

More Information

Additional Information:

For this assay, SNP(s) [rs73281406,rs77549261] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, non-DGV Variation

Gene Ontology Categories:

Process(es)

cell death
dopamine metabolic process
cellular protein metabolic process
regulation of neurotransmitter secretion
regulation of inclusion body assembly

Function(s)

protein binding
ubiquitin protein ligase binding
identical protein binding