Hs06287233_cn

• Gene Symbol: GAS2
• Assay Reference Genome Location: Chr.11:22820456 on build GRCh38
• Cytoband: 11p14.3

Target Gene Details

• Entrez Gene ID: 2620
• Gene Name: growth arrest specific 2
• Gene Aliases: -
• Location: Chr.11:22626113-22885930 on Build GRCh38
• Assay Gene Location: Within Intron 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GAS2	XM_017017532.1			XP_016873021.1

Target Gene Details

• Entrez Gene ID: 258010
• Gene Name: small VCP interacting protein
• Gene Aliases: -
• Location: Chr.11:22820263-22829862 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SVIP	NM_001320340.1	4	3120	NP_001307269.1
	NM_001320341.1			NP_001307270.1
	NM_001320342.1	4	3004	NP_001307271.1
	NM_148893.2	4	3011	NP_683691.1
	NR_135213.1	4	2966
	AA347778.1
	AK095023.1	1	1118
	AL833119.1	4	2984

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv523451	Chr.11:22807060 - 22847391 on Build GRCh38	Loss	CCDC179 SVIP GAS2
esv3625623	Chr.11:22803579 - 22866492 on Build GRCh38	Gain	CCDC179 SVIP GAS2
nsv1046773	Chr.11:22597901 - 23427777 on Build GRCh38	Loss	CCDC179 SVIP FANCF MIR8054 GAS2
nsv1049802	Chr.11:22813787 - 23248080 on Build GRCh38	Gain	CCDC179 SVIP GAS2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

apoptotic process
cell cycle arrest
regulation of cell shape
positive regulation of autophagy
negative regulation of protein complex assembly
positive regulation of protein lipidation
negative regulation of ER-associated ubiquitin-dependent protein catabolic process
negative regulation of retrograde protein transport, ER to cytosol
negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly

Function(s)

microtubule binding
protein binding
protein self-association
ATPase binding