Hs06317124_cn

• Gene Symbol: MICALCL
• Assay Reference Genome Location: Chr.11:12323381 on build GRCh38
• Cytoband: 11p15.3

Target Gene Details

• Entrez Gene ID: 84953
• Gene Name: MICAL C-terminal like
• Gene Aliases: Ebitein1
• Location: Chr.11:12286900-12359144 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MICALCL	NM_032867.2			NP_116256.2
	AK027872.1			BAB55422.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3625390	Chr.11:12320996 - 12405629 on Build GRCh38	Gain	PARVA MICALCL
nsv483000	Chr.11:10678454 - 12678453 on Build GRCh38	Loss	MIR8070 DKK3 LOC105376545 MICALCL MIR4299 USP47 MRVI1 LOC101928053 ZBED5-AS1 SNORD97 MICAL2 MIR6124 CSNK2A3 PARVA EIF4G2 GALNT18 ZBED5 LOC105376554 TEAD1 CTR9
nsv1039617	Chr.11:12273516 - 12324274 on Build GRCh38	Loss	MICALCL MICAL2
dgv1059n100	Chr.11:12197656 - 12685051 on Build GRCh38	Gain	PARVA MICALCL MICAL2 TEAD1

More Information

Additional Information:

For this assay, SNP(s) [rs138472124] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

multicellular organism development
spermatogenesis
biological_process
cell differentiation

Function(s)

mitogen-activated protein kinase binding