Hs06423761_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82661506 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3	3	1539	XP_005256392.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1			XP_016879531.1
	XM_017024043.1			XP_016879532.1
	AB209711.1			BAD92948.1
	AK124376.1	1	886
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	FN3K METRNL TBCD ZNF750 LOC101929552 FOXK2 MIR4525 LOC105371944 B3GNTL1 RAB40B WDR45B FN3KRP LOC105376791
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	FN3K TBCD ZNF750 RAB40B LOC101929552 MIR4525 FN3KRP LOC105376791
esv3641436	Chr.17:82659688 - 82666055 on Build GRCh38	Loss	RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	RAB40B FOXK2 MIR4525 WDR45B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	C17orf62 RAB40B OGFOD3 FOXK2 MIR4525 NARF WDR45B HEXDC
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	FN3K CCDC137 CEP131 LOC100130370 SLC25A10 ZNF750 ARL16 PCYT2 B3GNTL1 MAFG ASPSCR1 RAB40B HGS SIRT7 SECTM1 MIR3186 FN3KRP MRPL12 PDE6G LINC00482 C17orf62 LOC101929552 TMEM105 CSNK1D AATK ACTG1 NPB LOC105376790 TEX19 MCRIP1 DCXR SLC16A3 SLC38A10 NPLOC4 PPP1R27 P4HB MIR4525 MYADML2 FASN MAFG-AS1 SNORD134 OXLD1 BAHCC1 LRRC45 C17orf89 CCDC57 MIR6786 RAC3 RFNG ALYREF TBCD OGFOD3 ANAPC11 LOC101929511 FOXK2 NARF LOC105371944 MIR4740 DUS1L GPS1 NOTUM FAAP100 ARHGDIA TEPSIN LOC105371925 MIR6787 FSCN2 CD7 TSPAN10 PYCR1 WDR45B AATK-AS1 HEXDC STRA13 GCGR LOC105376791 UTS2R
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	RAB40B MIR4525
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	FN3K TBCD ZNF750 C17orf62 LOC101929552 OGFOD3 LOC101929511 FOXK2 MIR4525 NARF CSNK1D CD7 LOC105376790 TEX19 RAB40B WDR45B SECTM1 HEXDC FN3KRP LOC105376791 UTS2R
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	FN3K ZNF750 PCYT2 B3GNTL1 MAFG ASPSCR1 RAB40B SIRT7 SECTM1 FN3KRP C17orf62 LOC101929552 CSNK1D NPB LOC105376790 TEX19 MCRIP1 DCXR SLC16A3 PPP1R27 P4HB MIR4525 MYADML2 FASN MAFG-AS1 SNORD134 LRRC45 CCDC57 RAC3 RFNG METRNL ALYREF TBCD OGFOD3 ANAPC11 LOC101929511 FOXK2 NARF LOC105371944 DUS1L GPS1 NOTUM ARHGDIA MIR6787 CD7 PYCR1 WDR45B HEXDC STRA13 LOC105376791 UTS2R

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding