Hs06432741_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82665105 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1			XP_016879531.1
	AB209711.1			BAD92948.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	LOC105371944 TBCD MIR4525 FOXK2 ZNF750 WDR45B FN3KRP LOC101929552 B3GNTL1 METRNL FN3K LOC105376791 RAB40B
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	FN3K TBCD MIR4525 LOC105376791 ZNF750 RAB40B FN3KRP LOC101929552
nsv952395	Chr.17:82663725 - 82745024 on Build GRCh38	Deletion	FN3K MIR4525 LOC105376791 RAB40B FN3KRP LOC101929552
esv3641436	Chr.17:82659688 - 82666055 on Build GRCh38	Loss	RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	MIR4525 FOXK2 RAB40B WDR45B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	C17orf62 MIR4525 HEXDC NARF FOXK2 RAB40B OGFOD3 WDR45B
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	LOC105371944 DUS1L ARL16 FAAP100 ALYREF ARHGDIA TSPAN10 MIR6786 TMEM105 ZNF750 MAFG WDR45B MIR3186 MAFG-AS1 MCRIP1 ANAPC11 FN3K C17orf62 HEXDC ACTG1 AATK-AS1 GPS1 RFNG SLC25A10 LRRC45 PPP1R27 RAC3 FN3KRP CD7 CCDC137 LOC100130370 BAHCC1 PYCR1 OXLD1 FSCN2 FASN NPB SLC38A10 ASPSCR1 TBCD P4HB NPLOC4 GCGR OGFOD3 MIR4740 LOC101929552 MRPL12 B3GNTL1 HGS PCYT2 LOC105371925 MYADML2 LOC105376791 RAB40B CSNK1D SIRT7 CEP131 AATK SNORD134 MIR6787 CCDC57 MIR4525 LINC00482 NARF LOC101929511 FOXK2 SLC16A3 PDE6G TEX19 TEPSIN UTS2R STRA13 SECTM1 LOC105376790 DCXR NOTUM C17orf89
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	MIR4525 RAB40B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	TBCD MIR4525 NARF LOC101929511 FOXK2 ZNF750 TEX19 OGFOD3 WDR45B FN3KRP LOC101929552 CD7 FN3K C17orf62 HEXDC UTS2R LOC105376791 RAB40B CSNK1D SECTM1 LOC105376790
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	LOC105371944 DUS1L ALYREF ARHGDIA ZNF750 MAFG WDR45B METRNL MAFG-AS1 MCRIP1 ANAPC11 FN3K C17orf62 HEXDC GPS1 RFNG LRRC45 PPP1R27 RAC3 FN3KRP CD7 PYCR1 FASN NPB ASPSCR1 TBCD P4HB OGFOD3 LOC101929552 B3GNTL1 PCYT2 MYADML2 LOC105376791 RAB40B CSNK1D SIRT7 SNORD134 MIR6787 CCDC57 MIR4525 NARF LOC101929511 FOXK2 SLC16A3 TEX19 UTS2R STRA13 SECTM1 LOC105376790 DCXR NOTUM

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding