Hs06517151_cn

• Gene Symbol: LINC01344
• Assay Reference Genome Location: Chr.1:182204134 on build GRCh38
• Cytoband: 1q25.3

Target Gene Details

• Entrez Gene ID: 400799
• Gene Name: long intergenic non-protein coding RNA 1344
• Gene Aliases: GS1-122H1.2
• Location: Chr.1:182203945-182314061 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LINC01344	NR_104175.1
	AK128015.1
	BX096536.1

Target Gene Details

• Entrez Gene ID: 127665
• Gene Name: zinc finger protein 648
• Gene Aliases: -
• Location: Chr.1:182053740-182205330 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF648	XM_017000302.1	1	1197	XP_016855791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3588097	Chr.1:182203948 - 182218948 on Build GRCh38	Loss	ZNF648 LINC01344
esv2658469	Chr.1:182203950 - 182218951 on Build GRCh38	Deletion	ZNF648 LINC01344
nsv548358	Chr.1:182110851 - 183151893 on Build GRCh38	Gain	LOC105371644 LAMC1 LINC00272 RGS16 ZNF648 TEDDM1 RGS8 SHCBP1L RGSL1 LOC284648 LOC647070 NPL GLUL LINC01344 DHX9 RNASEL

More Information

Additional Information:

For this assay, SNP(s) [rs80217180] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

DNA binding
metal ion binding