Hs06596981_cn

• Gene Symbol: ACP6
• Assay Reference Genome Location: Chr.1:147657856 on build GRCh38
• Cytoband: 1q21.2

Target Gene Details

• Entrez Gene ID: 51205
• Gene Name: acid phosphatase 6, lysophosphatidic
• Gene Aliases: ACPL1, LPAP, PACPL1
• Location: Chr.1:147629658-147670543 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ACP6	NM_001323625.1			NP_001310554.1
	NM_016361.4			NP_057445.4
	NR_136633.1
	NR_136634.1
	NR_136635.1
	NR_136636.1
	XM_011509601.2			XP_011507903.1
	XM_017001422.1			XP_016856911.1
	AB030039.2			BAA94309.2
	AB031478.1			BAA89311.1
	AB209248.1			BAD92485.1
	AK000657.1			BAA91310.1
	AK308593.1
	AK310693.1
	AY358552.1			AAQ88916.1
	BC009965.1			AAH09965.1
	BC034686.1			AAH34686.1
	CR457101.1			CAG33382.1
	KJ534759.1
	KJ535036.1
	KJ535044.1
	KJ535055.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv327n100	Chr.1:146028214 - 148860637 on Build GRCh38	Gain	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 LOC100996517 GJA5 NBPF13P LOC100996763 FMO5 MIR6077 LOC101928979 PDIA3P1 BCL9 HYDIN2 ACP6 NBPF10 LOC284561 RNVU1-6 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 NBPF11 PRKAB2 MIR5087 LOC100505824 PDZK1P1 LOC728989 CHD1L NBPF12 PDE4DIP
nsv1005055	Chr.1:145642988 - 148991068 on Build GRCh38	Loss	POLR3C LOC105371242 RBM8A RNU1-13P LOC100132057 ANKRD35 PDZK1 LOC100996517 TXNIP NBPF13P LOC100996763 FMO5 MIR6077 LOC101928979 ITGA10 PDIA3P1 BCL9 PIAS3 HYDIN2 NBPF10 RNF115 GPR89A POLR3GL LOC284561 GJA8 NUDT17 RNVU1-7 CH17-408M7.1 NOTCH2NL LOC105371226 HFE2 CD160 PRKAB2 PEX11B MIR5087 LOC100505824 PDZK1P1 LOC728989 ANKRD34A PDE4DIP PPIAL4G LINC01138 NBPF14 NUDT4P2 GJA5 GNRHR2 ACP6 RNVU1-6 NUDT4P1 LINC00624 RNVU1-1 MIR6736 RNVU1-3 GPR89B LOC101927468 RNVU1-8 NBPF11 LIX1L CHD1L NBPF12
esv2761299	Chr.1:146068341 - 148926801 on Build GRCh38	Gain+Loss	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 LOC100996517 GJA5 NBPF13P LOC100996763 FMO5 MIR6077 PDIA3P1 BCL9 HYDIN2 ACP6 NBPF10 LOC284561 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 NBPF11 PRKAB2 MIR5087 LOC100505824 PDZK1P1 LOC728989 CHD1L NBPF12 PDE4DIP
nsv509457	Chr.1:145948024 - 149021821 on Build GRCh38	Insertion	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 LOC100996517 GJA5 TXNIP NBPF13P LOC100996763 FMO5 MIR6077 LOC101928979 PDIA3P1 BCL9 HYDIN2 ACP6 NBPF10 POLR3GL LOC284561 RNVU1-6 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 HFE2 NBPF11 PRKAB2 LIX1L MIR5087 LOC100505824 PDZK1P1 LOC728989 ANKRD34A CHD1L NBPF12 PDE4DIP
nsv1132304	Chr.1:146186094 - 148977674 on Build GRCh38	Duplication	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 LOC100996517 GJA5 NBPF13P LOC100996763 FMO5 MIR6077 PDIA3P1 BCL9 HYDIN2 ACP6 LOC284561 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 NBPF11 PRKAB2 MIR5087 LOC100505824 PDZK1P1 LOC728989 CHD1L NBPF12 PDE4DIP
nsv831426	Chr.1:147618125 - 147793153 on Build GRCh38	Loss	BCL9 GJA5 ACP6
nsv1003688	Chr.1:146036817 - 148934526 on Build GRCh38	Gain	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 LOC100996517 GJA5 NBPF13P LOC100996763 FMO5 MIR6077 LOC101928979 PDIA3P1 BCL9 HYDIN2 ACP6 NBPF10 LOC284561 RNVU1-6 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 NBPF11 PRKAB2 MIR5087 LOC100505824 PDZK1P1 LOC728989 CHD1L NBPF12 PDE4DIP
dgv66e199	Chr.1:146055970 - 149056514 on Build GRCh38	Deletion	PPIAL4G LINC01138 LOC105371242 NBPF14 RNU1-13P LOC100132057 NUDT4P2 NBPF9 LOC100996517 GJA5 NBPF13P LOC100996763 FMO5 MIR6077 LOC101928979 PDIA3P1 BCL9 HYDIN2 ACP6 NBPF10 LOC284561 NUDT4P1 GJA8 RNVU1-7 LINC00624 CH17-408M7.1 RNVU1-1 NOTCH2NL RNVU1-3 GPR89B LOC105371226 LOC101927468 RNVU1-8 NBPF11 PRKAB2 MIR5087 LOC100505824 PDZK1P1 LOC728989 CHD1L NBPF12 PDE4DIP

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphatase

Gene Ontology Categories:

Process(es)

phospholipid metabolic process
dephosphorylation
lysobisphosphatidic acid metabolic process

Function(s)

acid phosphatase activity
lysophosphatidic acid phosphatase activity