Hs06649132_cn

• Gene Symbol: CPNE4
• Assay Reference Genome Location: Chr.3:131985912 on build GRCh38
• Cytoband: 3q22.1

Target Gene Details

• Entrez Gene ID: 131034
• Gene Name: copine 4
• Gene Aliases: COPN4, CPN4
• Location: Chr.3:131533560-132285702 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CPNE4	NM_001289112.1			NP_001276041.1
	NM_130808.2			NP_570720.1
	NM_153429.1			NP_702907.1
	XM_011512406.2			XP_011510708.1
	XM_011512407.2			XP_011510709.1
	XM_017005693.1			XP_016861182.1
	XM_017005695.1			XP_016861184.1
	AF465770.1			AAL74190.1
	AF465771.1			AAL74191.1
	AK056175.1			BAB71111.1
	AK128117.1
	AK295557.1
	BC014396.1			AAH14396.1
	BC075046.2			AAH75046.1
	DA156722.1
	DA194161.1
	DC330179.1

Target Gene Details

• Entrez Gene ID: 100847040
• Gene Name: microRNA 5704
• Gene Aliases: -
• Location: Chr.3:131985855-131985931 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR5704	NR_049890.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv591727	Chr.3:131983499 - 131994722 on Build GRCh38	Gain	CPNE4 MIR5704
nsv511224	Chr.3:131977259 - 131994722 on Build GRCh38	Loss	CPNE4 MIR5704
nsv829727	Chr.3:131928810 - 132084601 on Build GRCh38	Gain+Loss	CPNE4 MIR5704
nsv1006656	Chr.3:131383932 - 132145572 on Build GRCh38	Gain	MRPL3 SNORA58 CPNE4 MIR5704 BCL2L12P1 NUDT16
nsv508244	Chr.3:131975933 - 132002808 on Build GRCh38	Deletion	CPNE4 MIR5704

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding