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See other SHISA5 CNV Assays ›
Gene Symbol
SHISA5
Assay Reference Genome
Location

Chr.3:48470583 on build GRCh38
Cytoband
3p21.31
Assay ID Hs06671241_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51246

Gene Name:

 shisa family member 5

Gene Aliases:

 SCOTIN

Location:

 Chr.3:48467798-48504826 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SHISA5 NM_001272065.1 NP_001258994.1
NM_001272066.1 NP_001258995.1
NM_001272067.1 NP_001258996.1
NM_001272068.1 NP_001258997.1
NM_001272082.1 NP_001259011.1
NM_001272083.1 NP_001259012.1
NM_016479.4 NP_057563.3
XM_005265205.1 XP_005265262.1
XM_006713188.2 XP_006713251.1
XM_011533796.1 XP_011532098.1
AB097007.1 BAC77360.1
AF151051.1 AAF36137.1
AF520698.1 AAM74232.1
AK056328.1 BAB71152.1
AK075441.1 BAC11623.1
AK124652.1
AK298799.1
AK298842.1
AK301191.1
AK310083.1
AL117413.1 CAH10718.1
AL832568.1 CAH10587.1
BC001463.2 AAH01463.2
BI552637.1
BX336842.2
BX344125.2
BX379507.2
DA025113.1
DA045437.1
DA046900.1
DA657994.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834684 Chr.3:48344209 - 48551890 on Build GRCh38 Gain CCDC51 TMA7 MIR6823 ATRIP TREX1 SHISA5 PFKFB4 FBXW12 PLXNB1
dgv8315n54 Chr.3:48464432 - 48478412 on Build GRCh38 Loss ATRIP TREX1 SHISA5
nsv590242 Chr.3:48392157 - 48518906 on Build GRCh38 Loss CCDC51 TMA7 ATRIP TREX1 SHISA5 PFKFB4 FBXW12 PLXNB1
nsv508917 Chr.3:48400224 - 48499357 on Build GRCh38 Insertion CCDC51 TMA7 ATRIP TREX1 SHISA5 PLXNB1

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