Name: [Hs06787219_cn] [DAXX]
Creator: Thermo Fisher Scientific
Keywords: [DAXX] Assay, [death domain associated protein] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	1616
Gene Name:	death domain associated protein
Gene Aliases:	BING2, DAP6, EAP1
Location:	Chr.6:33318558-33323016 on Build GRCh38
Assay Gene Location:	Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DAXX	NM_001141969.1	1	32	NP_001135441.1
	NM_001141970.1	1	32	NP_001135442.1
	NM_001254717.1	1	32	NP_001241646.1
	NM_001350.4	1	32	NP_001341.1
	XM_005248860.3			XP_005248917.1
	AF039136.1			AAB92671.1
	AK223404.1	1	30	BAD97124.1
	AK292187.1	1	30
	AK303767.1
	AK303854.1
	AK313034.1
	DC345308.1	1	32
	DC359186.1	1	32

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830635	Chr.6:33270228 - 33446010 on Build GRCh38	Loss	RGL2 WDR46 B3GALT4 PFDN6 MIR5004 TAPBP DAXX MIR6873 VPS52 SYNGAP1 CUTA ZBTB22 RPS18 PHF1 MIR6834 KIFC1
nsv1073969	Chr.6:31456422 - 33480523 on Build GRCh38	Deletion	MIR4646 WDR46 B3GALT4 MIR5004 LY6G6D SYNGAP1 LY6G5C HLA-DRB5 CYP21A2 LOC100294145 CSNK2B MIR1236 PSMB8 BTNL2 BRD2 VARS C6orf25 MCCD1 DXO SLC44A4 DAXX SNORD48 MSH5 APOM LST1 HLA-DQB2 MIR6832 PPP1R2P1 HSPA1L DDX39B-AS1 DDX39B HCG23 NOTCH4 DDAH2 SNORD84 MIR6873 AIF1 FKBPL HLA-DQB1-AS1 LOC100507547 RXRB NELFE SAPCD1 HLA-DPB2 PRRT1 LOC102725068 HLA-DMA SLC39A7 CFB SKIV2L LOC101929163 LY6G6E HLA-DQB1 EGFL8 CYP21A1P GPSM3 C6orf47 RNF5 HLA-DQA2 AGER EHMT2 PSMB9 HSPA1A BAG6 CLIC1 AGPAT1 TAP2 ABHD16A HLA-DRB6 MIR3135B TAP1 HSPA1B PSMB8-AS1 VPS52 C6orf48 CUTA ZBTB22 C2-AS1 SNORD52 C4A HLA-DQA1 SAPCD1-AS1 ATF6B PPT2 PBX2 NEU1 PPT2-EGFL8 COL11A2 HCG24 LSM2 HCG25 STK19 TNXA HCG26 C2 RPS18 LTB HLA-DRB1 MIR6834 HLA-DMB MIR6721 HCP5 TNXB VWA7 TAPBP HLA-DRA LY6G6F SNORD117 LY6G5B LOC100287329 HSD17B8 LTA ZBTB9 NFKBIL1 ATP6V1G2 C4B KIFC1 HLA-DOA RGL2 MICB NCR3 PFDN6 PRRC2A ZBTB12 RING1 GPANK1 HLA-DOB C6orf10 HLA-DPA1 PHF1 MSH5-SAPCD1 LY6G6C TNF HLA-DPB1 ATP6V1G2-DDX39B MIR6833 SNORA38 MIR219A1
esv22635	Chr.6:33321734 - 33328508 on Build GRCh38	Loss	DAXX
nsv830634	Chr.6:33193440 - 33362968 on Build GRCh38	Loss	RGL2 SLC39A7 WDR46 B3GALT4 PFDN6 HCG25 TAPBP RING1 DAXX MIR6873 VPS52 ZBTB22 HSD17B8 RXRB RPS18 MIR6834 MIR219A1
nsv1112900	Chr.6:31455323 - 33480423 on Build GRCh38	Deletion	MIR4646 WDR46 B3GALT4 MIR5004 LY6G6D SYNGAP1 LY6G5C HLA-DRB5 CYP21A2 LOC100294145 CSNK2B MIR1236 PSMB8 BTNL2 BRD2 VARS C6orf25 MCCD1 DXO SLC44A4 DAXX SNORD48 MSH5 APOM LST1 HLA-DQB2 MIR6832 PPP1R2P1 HSPA1L DDX39B-AS1 DDX39B HCG23 NOTCH4 DDAH2 SNORD84 MIR6873 AIF1 FKBPL HLA-DQB1-AS1 LOC100507547 RXRB NELFE SAPCD1 HLA-DPB2 PRRT1 LOC102725068 HLA-DMA SLC39A7 CFB SKIV2L LOC101929163 LY6G6E HLA-DQB1 EGFL8 CYP21A1P GPSM3 C6orf47 RNF5 HLA-DQA2 AGER EHMT2 PSMB9 HSPA1A BAG6 CLIC1 AGPAT1 TAP2 ABHD16A HLA-DRB6 MIR3135B TAP1 HSPA1B PSMB8-AS1 VPS52 C6orf48 CUTA ZBTB22 C2-AS1 SNORD52 C4A HLA-DQA1 SAPCD1-AS1 ATF6B PPT2 PBX2 NEU1 PPT2-EGFL8 COL11A2 HCG24 LSM2 HCG25 STK19 TNXA HCG26 C2 RPS18 LTB HLA-DRB1 MIR6834 HLA-DMB MIR6721 HCP5 TNXB VWA7 TAPBP HLA-DRA LY6G6F SNORD117 LY6G5B LOC100287329 HSD17B8 LTA ZBTB9 NFKBIL1 ATP6V1G2 C4B KIFC1 HLA-DOA RGL2 MICB NCR3 PFDN6 PRRC2A ZBTB12 RING1 GPANK1 HLA-DOB C6orf10 HLA-DPA1 PHF1 MSH5-SAPCD1 LY6G6C TNF HLA-DPB1 ATP6V1G2-DDX39B MIR6833 SNORA38 MIR219A1
nsv1119076	Chr.6:32595823 - 33480623 on Build GRCh38	Deletion	WDR46 B3GALT4 TAP2 MIR5004 MIR3135B TAPBP TAP1 PSMB8-AS1 MIR6873 VPS52 SYNGAP1 CUTA ZBTB22 HSD17B8 HLA-DQB1-AS1 LOC100294145 RXRB ZBTB9 HLA-DQA1 HLA-DPB2 PSMB8 BRD2 KIFC1 HLA-DMA HLA-DOA RGL2 SLC39A7 COL11A2 PFDN6 HCG24 HCG25 RING1 DAXX HLA-DOB HLA-DQB1 HLA-DPA1 HLA-DQA2 RPS18 PHF1 MIR6834 HLA-DQB2 HLA-DMB PPP1R2P1 HLA-DPB1 PSMB9 MIR219A1