Hs06904013_cn

• Gene Symbol: CLTA
• Assay Reference Genome Location: Chr.9:36202293 on build GRCh38
• Cytoband: 9p13.3

Target Gene Details

• Entrez Gene ID: 1211
• Gene Name: clathrin light chain A
• Gene Aliases: LCA
• Location: Chr.9:36190856-36212062 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLTA	NM_001076677.2			NP_001070145.1
	NM_001184760.1			NP_001171689.1
	NM_001184761.1			NP_001171690.1
	NM_001184762.1			NP_001171691.1
	NM_001311203.1			NP_001298132.1
	NM_001311204.1			NP_001298133.1
	NM_001311205.1			NP_001298134.1
	NM_001311206.1			NP_001298135.1
	NM_001833.3			NP_001824.1
	NM_007096.3			NP_009027.1
	NR_132349.1
	XM_017014257.1			XP_016869746.1
	XM_017014258.1			XP_016869747.1
	AK225153.1
	AK291078.1
	AK295692.1
	BC009201.2			AAH09201.1
	BC019287.1			AAH19287.1
	BF797444.1
	BI090227.1
	BI600540.1
	BM423666.1
	BT007170.1			AAP35834.1
	CA441539.1
	CN300759.1
	DN991152.1
	DQ270158.1			ABB76683.1
	DT220470.1
	M20471.1			AAA51817.1
	M20472.1			AAA59505.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1017711	Chr.9:36073424 - 36548245 on Build GRCh38	Gain	RECK CLTA GLIPR2 RNF38 CCIN GNE
esv34080	Chr.9:36005887 - 36453179 on Build GRCh38	Loss	RECK CLTA GLIPR2 RNF38 CCIN GNE

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

vesicle coat protein

Gene Ontology Categories:

Process(es)

intracellular protein transport
microtubule-based movement
antigen processing and presentation of exogenous peptide antigen via MHC class II
negative regulation of epidermal growth factor receptor signaling pathway
clathrin-mediated endocytosis

Function(s)

molecular_function
structural molecule activity
protein binding
clathrin heavy chain binding
peptide binding