Genomic Map
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Target Gene Details
Entrez Gene ID: | 2100 |
Gene Name: | estrogen receptor 2 |
Gene Aliases: |
ER-BETA, ESR-BETA, ESRB, ESTRB, Erb, NR3A2 |
Location: |
Chr.14:64226712-64338631 on Build GRCh38 |
Assay Gene Location: | Within Intron 15 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ESR2 | NM_001040275.1 | NP_001035365.1 | ||
| NM_001214902.1 | NP_001201831.1 | |||
| NM_001271876.1 | NP_001258805.1 | |||
| NM_001291712.1 | NP_001278641.1 | |||
| NM_001291723.1 | NP_001278652.1 | |||
| NR_073496.1 | ||||
| XM_017021084.1 | XP_016876573.1 | |||
| AB006589.1 | BAA31966.1 | |||
| AF051428.1 | AAC05751.1 | |||
| AF060555.1 | AAC15234.1 | |||
| AF061054.1 | AAC39784.1 | |||
| AF061055.1 | AAC39785.1 | |||
| AF124790.1 | AAD32580.1 | |||
| AK292370.1 | ||||
| DQ777076.1 | ||||
| DQ838582.1 | ||||
| DQ838583.1 | ||||
| HQ692821.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1050378 | Chr.14:64219825 - 64236294 on Build GRCh38 | Gain |
 ESR2
SYNE2
|
| nsv564905 | Chr.14:63953695 - 64287643 on Build GRCh38 | Gain |
MIR548H1
ESR2
SYNE2
|
| esv3634746 | Chr.14:64169924 - 64294015 on Build GRCh38 | Loss |
ESR2
SYNE2
|
| esv2748779 | Chr.14:63663324 - 66595809 on Build GRCh38 | Deletion |
LOC100128233
MIR4708
PPP1R36
SPTB
LOC100506321
PLEKHG3
RAB15
SYNE2
FUT8-AS1
ZBTB1
GPX2
ZBTB25
SGPP1
ESR2
MIR625
CHURC1-FNTB
MIR548H1
MIR7855
CHURC1
FUT8
MAX
GPHN
AKAP5
MIR4706
FNTB
LOC102723809
TEX21P
LINC00238
MTHFD1
HSPA2
|
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Additional Information:
For this assay, SNP(s) [rs75301620] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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