Hs07138541_cn

• Gene Symbol: HIF3A
• Assay Reference Genome Location: Chr.19:46317781 on build GRCh38
• Cytoband: 19q13.32

Target Gene Details

• Entrez Gene ID: 64344
• Gene Name: hypoxia inducible factor 3 alpha subunit
• Gene Aliases: HIF-3A, HIF3-alpha-1, IPAS, MOP7, PASD7, bHLHe17
• Location: Chr.19:46297046-46343433 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HIF3A	NM_022462.4			NP_071907.4
	NM_152794.3			NP_690007.1
	NM_152795.3			NP_690008.2
	NM_152796.2			NP_690009.1
	XM_005259152.4			XP_005259209.1
	XM_005259153.3			XP_005259210.2
	XM_005259155.4			XP_005259212.1
	XM_005259156.4			XP_005259213.1
	XM_017027132.1			XP_016882621.1
	XM_017027133.1			XP_016882622.1
	XM_017027134.1			XP_016882623.1
	XM_017027135.1			XP_016882624.1
	XM_017027136.1			XP_016882625.1
	XM_017027137.1			XP_016882626.1
	XM_017027138.1			XP_016882627.1
	XM_017027139.1			XP_016882628.1
	XM_017027140.1			XP_016882629.1
	XM_017027141.1			XP_016882630.1
	XM_017027142.1			XP_016882631.1
	AB054067.1			BAB69689.1
	AB295039.1
	AF463492.1			AAL69947.1
	AK021421.1			BAB13819.1
	AK021653.1			BAB13865.1
	AK027725.1			BAB55324.1
	AK297828.1
	AK299699.1
	AK304747.1
	AK314680.1
	BC080551.1			AAH80551.1
	BE250295.1

More Information

Additional Information:

For this assay, SNP(s) [rs79828875] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, non-DGV Variation

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

angiogenesis
transcription from RNA polymerase II promoter
apoptotic process
positive regulation of transcription from RNA polymerase II promoter
regulation of transcription from RNA polymerase II promoter in response to hypoxia

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
protein dimerization activity