Hs07152941_cn

• Gene Symbol: LOC390937
• Assay Reference Genome Location: Chr.19:41917064 on build GRCh38
• Cytoband: 19q13.2

Target Gene Details

• Entrez Gene ID: 390937
• Gene Name: Ets2 repressor factor-like
• Gene Aliases: -
• Location: Chr.19:41907549-41928721 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC390937	XM_017027573.1			XP_016883062.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv520239	Chr.19:41853387 - 42426852 on Build GRCh38	Loss	ZNF574 ARHGEF1 ZNF526 GSK3A GRIK5 MIR4323 LOC101930071 ERF POU2F2 MIR6797 TMEM145 CNFN LIPE CD79A LOC390937 PAFAH1B3 MIR8077 ATP1A3 MEGF8 LOC100505622 RPS19 CIC PRR19 RABAC1 LOC100505585 DEDD2 LIPE-AS1
nsv953580	Chr.19:41888230 - 41997948 on Build GRCh38	Deletion	ATP1A3 LOC100505585 ARHGEF1 LOC390937 RABAC1
dgv3550n100	Chr.19:41916194 - 42001892 on Build GRCh38	Gain	ATP1A3 LOC100505585 LOC390937 GRIK5 RABAC1
nsv1118619	Chr.19:41915248 - 41921748 on Build GRCh38	Duplication	LOC390937
nsv522854	Chr.19:41613927 - 42426852 on Build GRCh38	Gain	ZNF574 ARHGEF1 ZNF526 GSK3A CEACAM4 GRIK5 MIR4323 LOC101930071 ERF POU2F2 MIR6797 TMEM145 CNFN LIPE CEACAM5 CD79A LOC390937 DMRTC2 PAFAH1B3 CEACAM6 MIR8077 ATP1A3 MEGF8 LOC100505622 RPS19 CEACAM3 CIC CEACAM7 PRR19 RABAC1 LOC100505585 LYPD4 DEDD2 LIPE-AS1

More Information

Additional Information:

For this assay, SNP(s) [rs79600216] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor