Hs07184271_cn

• Gene Symbol: NELFCD
• Assay Reference Genome Location: Chr.20:58982617 on build GRCh38
• Cytoband: 20q13.32

Target Gene Details

• Entrez Gene ID: 51497
• Gene Name: negative elongation factor complex member C/D
• Gene Aliases: HSPC130, NELF-C, NELF-D, TH1, TH1L
• Location: Chr.20:58981208-58995133 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NELFCD	NM_198976.2			NP_945327.2
	AF161479.1			AAF29094.1
	AJ238379.1			CAB64339.1
	AK001316.1			BAA91618.1
	AK023310.1			BAB14519.1
	AK023927.1			BAB14729.1
	AK293410.1
	AK304310.1
	BC014952.1			AAH14952.1
	BI459250.1
	BX647417.1
	HY015074.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv525118	Chr.20:58972890 - 58996708 on Build GRCh38	Loss	CTSZ NELFCD

More Information

Additional Information:

For this assay, SNP(s) [rs79087230] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
negative regulation of transcription, DNA-templated
positive regulation of viral transcription

Function(s)

protein binding