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See other MIR1-1HG CNV Assays ›
Gene Symbol
MIR1-1HG
Assay Reference Genome
Location

Chr.20:62567770 on build GRCh38
Cytoband
20q13.33
Assay ID Hs07185006_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 128826

Gene Name:

 MIR1-1 host gene

Gene Aliases:

 C20orf166, MIR133A2HG, dJ353C17.1

Location:

 Chr.20:62550453-62570764 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIR1-1HG NM_001302812.1 NP_001289741.1
NM_178463.3 NP_848558.1
AK056985.1
BC110595.2 AAI10596.1
DA896197.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4344n100 Chr.20:62436472 - 62569333 on Build GRCh38 Gain GATA5 MIR1-1HG MIR1-1 MIR133A2 C20orf166-AS1
esv2422398 Chr.20:62207833 - 62674040 on Build GRCh38 Duplication LOC105369209 OSBPL2 LAMA5 HRH3 RBBP8NL CABLES2 LAMA5-AS1 MIR4758 GATA5 MIR1-1HG ADRM1 RPS21 SLCO4A1-AS1 MIR1-1 MIR133A2 SLCO4A1 C20orf166-AS1
nsv586496 Chr.20:62332390 - 62812195 on Build GRCh38 Gain LOC107985428 LAMA5 RBBP8NL CABLES2 LAMA5-AS1 MIR4758 GATA5 MIR1-1HG MRGBP OGFR RPS21 LOC107987285 LINC00659 SLCO4A1-AS1 MIR1-1 MIR133A2 OGFR-AS1 SLCO4A1 NTSR1 C20orf166-AS1
nsv953302 Chr.20:62345345 - 62831248 on Build GRCh38 Deletion COL9A3 LOC107985428 LAMA5 RBBP8NL CABLES2 LAMA5-AS1 GATA5 MIR1-1HG MRGBP OGFR RPS21 LOC107987285 LINC00659 SLCO4A1-AS1 MIR1-1 MIR133A2 OGFR-AS1 SLCO4A1 NTSR1 C20orf166-AS1
nsv459068 Chr.20:62444168 - 62577283 on Build GRCh38 Gain GATA5 MIR1-1HG MIR1-1 MIR133A2 C20orf166-AS1
dgv4343n100 Chr.20:62391262 - 62569333 on Build GRCh38 Gain CABLES2 GATA5 MIR1-1HG MIR1-1 MIR133A2 C20orf166-AS1 RBBP8NL
nsv470556 Chr.20:62212004 - 62577283 on Build GRCh38 Loss LOC105369209 OSBPL2 LAMA5 HRH3 RBBP8NL CABLES2 LAMA5-AS1 MIR4758 GATA5 MIR1-1HG ADRM1 RPS21 MIR1-1 MIR133A2 C20orf166-AS1

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More Information


Additional Information:

For this assay, SNP(s) [rs111547354,rs113695393] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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