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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341146 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07405626_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1 1 225
AK095200.1 1 176
DQ266102.1 1 225
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CCNF RNPS1 HBA2 LOC729652 LOC100287175 SPSB3 PDPK1 LOC105371049 PRR25 IGFALS DDX11L10 NME4 WDR90 GNPTG SNORD60 EME2 TPSD1 NTN3 MIR662 MIR4516 MRPL28 RPL3L PDIA2 TBL3 SSTR5 FAHD1 TPSB2 RNF151 ZNF598 ECI1 NOXO1 TPSAB1 LOC107987233 NDUFB10 HAGH LOC105371045 WASIR2 MIR6768 TSC2 SYNGR3 TPSG1 LOC105371184 HS3ST6 MIR4717 RAB11FIP3 RHBDL1 CCDC78 CHTF18 SNRNP25 MPG SOX8 HN1L NUBP2 MIR3178 CEMP1 TMEM8A SSTR5-AS1 KCTD5 MAPK8IP3 AMDHD2 RGS11 IFT140 PRR35 RHBDF1 CACNA1H SNORA64 HBA1 MIR1225 METRN MIR6767 MIR3180-5 GFER LOC105371047 FAM234A MIR3177 METTL26 UNKL BAIAP3 MIR940 LINC00254 GNG13 HBZ LOC106660606 MIR6511B1 PRSS27 PRSS29P NARFL CRAMP1 PIGQ ATP6V0C MIR6859-4 LMF1 LOC105371038 RPL23AP5 FAM173A SNHG19 LOC107984876 NHLRC4 AXIN1 POLR3K MLST8 MSRB1 SLC9A3R2 LOC100134368 C16orf59 C1QTNF8 BRICD5 MCRIP2 JMJD8 WFIKKN1 MRPS34 MIR3677 ABCA17P NME3 PTX4 LMF1-AS1 MEIOB MIR3176 SNHG9 WDR24 CASKIN1 RPUSD1 ABCA3 TSR3 DECR2 LOC105371046 RHOT2 UBE2I TRAF7 TMEM204 CCDC154 ERVK13-1 NTHL1 TBC1D24 HBQ1 HBM FBXL16 DNASE1L2 NPW PKD1 HAGHL CAPN15 LOC101929280 MIR5587 LOC652276 ARHGDIG LINC00235 RAB26 RAB40C SNORA78 MSLN E4F1 STUB1 RPS2 FLJ42627 NPRL3 LUC7L TELO2 C16orf91 SNORA10 PGP CLCN7
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss MIR4717 MIR3677 MIR940 ABCA17P RNPS1 LOC106660606 ABCA3
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR4717 CCNF ATP6V0C RNPS1 LOC729652 SNHG19 TRAF7 PDPK1 LOC105371049 MLST8 MIR3178 CEMP1 TBC1D24 AMDHD2 C16orf59 SNORD60 DNASE1L2 BRICD5 PKD1 NTN3 LOC652276 MIR4516 MIR3677 ABCA17P MIR1225 MIR6767 RAB26 MIR3180-5 E4F1 ECI1 MIR940 CASKIN1 MIR6768 TSC2 PGP LOC106660606 MIR6511B1 ABCA3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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