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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341400 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07405660_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1
AK095200.1
DQ266102.1
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR5587 MIR4516 SYNGR3 LOC107987233 MIR940 NTN3 MRPS34 IFT140 HBA2 LOC105371046 KCTD5 GNPTG BAIAP3 LMF1 SNORD60 RPUSD1 ERVK13-1 CAPN15 MIR6511B1 RPL23AP5 C16orf91 MIR6767 LOC729652 PDIA2 ATP6V0C FBXL16 PRR35 TMEM204 LUC7L MAPK8IP3 MCRIP2 MRPL28 TBL3 LOC106660606 MEIOB MLST8 CCDC154 MIR6859-4 AXIN1 TPSAB1 E4F1 SNHG19 SNHG9 SSTR5-AS1 CASKIN1 PDPK1 SLC9A3R2 JMJD8 MSLN METRN UBE2I HBA1 MIR4717 STUB1 RAB11FIP3 CEMP1 GFER LOC107984876 MIR3178 TPSG1 LOC100287175 CHTF18 WFIKKN1 PRSS27 NTHL1 UNKL LOC652276 NME3 HAGHL MIR3176 TSR3 MIR3180-5 NHLRC4 MIR3677 CACNA1H LOC105371038 LOC100134368 FAHD1 NPRL3 FAM234A RAB40C HBZ RHOT2 LOC105371045 TPSD1 NDUFB10 RAB26 HAGH NME4 ARHGDIG DECR2 NUBP2 PIGQ METTL26 LOC105371049 FLJ42627 PRSS29P NARFL HS3ST6 RPL3L EME2 MIR6768 DDX11L10 RGS11 SNORA64 BRICD5 CLCN7 WDR90 AMDHD2 DNASE1L2 LINC00235 TBC1D24 RHBDL1 SNRNP25 RNPS1 SNORA10 RPS2 HBQ1 MPG LOC105371047 CCNF GNG13 SNORA78 SSTR5 ZNF598 TRAF7 MSRB1 TELO2 SOX8 HN1L NOXO1 MIR1225 WDR24 RHBDF1 HBM TMEM8A CCDC78 C16orf59 CRAMP1 LOC105371184 ABCA17P IGFALS MIR662 PKD1 RNF151 WASIR2 TPSB2 MIR3177 TSC2 POLR3K PGP PTX4 ECI1 LMF1-AS1 ABCA3 SPSB3 LOC101929280 NPW FAM173A C1QTNF8 PRR25 LINC00254
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss RNPS1 MIR4717 MIR3677 ABCA17P MIR940 LOC106660606 ABCA3
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR4516 LOC105371049 MIR4717 C16orf59 ABCA17P MIR940 NTN3 CEMP1 PKD1 MIR6768 MIR3178 BRICD5 SNORD60 MIR6511B1 AMDHD2 TSC2 DNASE1L2 MIR6767 TBC1D24 LOC729652 PGP LOC652276 RNPS1 ATP6V0C ECI1 MIR3180-5 MIR3677 LOC106660606 ABCA3 CCNF MLST8 RAB26 TRAF7 E4F1 SNHG19 CASKIN1 MIR1225 PDPK1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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