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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341813 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07406004_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1
AK095200.1
DQ266102.1
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PRR25 SNHG19 PRSS27 HAGHL MSLN BAIAP3 SNORA64 GFER LOC105371046 HBQ1 AXIN1 NME4 ABCA3 TRAF7 DNASE1L2 METRN TPSB2 RPL23AP5 TSC2 EME2 LOC105371049 SSTR5 PTX4 NOXO1 HBM PDIA2 NPRL3 TBC1D24 CLCN7 HN1L FAHD1 CRAMP1 LUC7L NDUFB10 MRPL28 ECI1 MIR6859-4 C16orf91 RHBDL1 HBA1 RNF151 FAM234A MRPS34 MIR6511B1 PDPK1 MIR5587 BRICD5 PRSS29P METTL26 SLC9A3R2 AMDHD2 MAPK8IP3 SPSB3 TSR3 SNORD60 RAB26 UNKL LOC101929280 SYNGR3 MSRB1 NHLRC4 STUB1 GNG13 HBA2 CEMP1 PKD1 C1QTNF8 WFIKKN1 SSTR5-AS1 HS3ST6 NTN3 NUBP2 MCRIP2 LOC100287175 LOC105371045 MIR6767 SNHG9 MIR4717 LOC652276 RAB40C SNRNP25 WDR90 RHBDF1 TPSG1 MIR3177 LINC00235 MIR940 RNPS1 IFT140 MIR662 IGFALS FLJ42627 FBXL16 TPSAB1 CCNF RGS11 DECR2 RPUSD1 TELO2 LOC107987233 MIR1225 NTHL1 MIR4516 RAB11FIP3 NPW KCTD5 GNPTG TMEM8A LOC107984876 RPS2 MLST8 LINC00254 LOC100134368 TPSD1 NME3 HBZ CAPN15 ARHGDIG SNORA10 MIR3178 JMJD8 TBL3 ATP6V0C ABCA17P LMF1-AS1 E4F1 UBE2I RHOT2 CASKIN1 CACNA1H FAM173A SNORA78 LOC106660606 MIR3176 CCDC78 LOC105371047 DDX11L10 ERVK13-1 WASIR2 CCDC154 MIR6768 MIR3180-5 ZNF598 LOC105371038 PRR35 CHTF18 PGP LOC729652 POLR3K RPL3L LOC105371184 MPG NARFL PIGQ HAGH WDR24 TMEM204 LMF1 MIR3677 C16orf59 MEIOB SOX8
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss RNPS1 ABCA17P LOC106660606 MIR4717 ABCA3 MIR3677 MIR940
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain ABCA17P MIR6767 ECI1 E4F1 MIR4717 LOC652276 SNHG19 MIR940 CASKIN1 RNPS1 MIR6511B1 PDPK1 LOC106660606 BRICD5 ABCA3 CCNF TRAF7 AMDHD2 DNASE1L2 MIR6768 MIR1225 SNORD60 RAB26 MIR3180-5 TSC2 MIR4516 PGP LOC729652 LOC105371049 CEMP1 PKD1 MLST8 TBC1D24 NTN3 MIR3677 MIR3178 C16orf59 ATP6V0C

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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