Hs07495602_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82676036 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_017024042.1			XP_016879531.1
	AB209711.1			BAD92948.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	FOXK2 B3GNTL1 LOC101929552 TBCD LOC105376791 MIR4525 WDR45B METRNL RAB40B FN3K ZNF750 LOC105371944 FN3KRP
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	RAB40B LOC101929552 TBCD FN3K LOC105376791 MIR4525 ZNF750 FN3KRP
nsv952395	Chr.17:82663725 - 82745024 on Build GRCh38	Deletion	RAB40B LOC101929552 FN3K LOC105376791 MIR4525 FN3KRP
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	FOXK2 WDR45B RAB40B MIR4525
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	FOXK2 WDR45B C17orf62 RAB40B HEXDC MIR4525 NARF OGFOD3
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	SNORD134 TMEM105 HGS RFNG C17orf62 ALYREF ARHGDIA TBCD MIR4525 ANAPC11 OGFOD3 SECTM1 MYADML2 FSCN2 UTS2R C17orf89 NOTUM FN3K CCDC137 LRRC45 TSPAN10 MIR3186 PYCR1 GPS1 FOXK2 MIR6786 B3GNTL1 ASPSCR1 DUS1L LINC00482 MCRIP1 LOC101929552 LOC101929511 CD7 GCGR STRA13 ARL16 NPB AATK-AS1 LOC100130370 RAB40B LOC105376790 TEX19 LOC105371944 SLC25A10 CSNK1D SLC38A10 LOC105371925 PCYT2 PDE6G MIR6787 OXLD1 MRPL12 MAFG SIRT7 CCDC57 AATK SLC16A3 FAAP100 MAFG-AS1 P4HB ZNF750 PPP1R27 BAHCC1 MIR4740 FASN LOC105376791 CEP131 NARF NPLOC4 DCXR WDR45B TEPSIN ACTG1 HEXDC RAC3 FN3KRP
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	RAB40B MIR4525
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	FOXK2 CSNK1D C17orf62 LOC101929552 LOC101929511 TBCD LOC105376791 MIR4525 NARF CD7 OGFOD3 SECTM1 WDR45B RAB40B UTS2R LOC105376790 HEXDC FN3K TEX19 ZNF750 FN3KRP
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	SNORD134 RFNG C17orf62 ALYREF ARHGDIA TBCD MIR4525 ANAPC11 OGFOD3 SECTM1 MYADML2 UTS2R NOTUM FN3K LRRC45 PYCR1 GPS1 FOXK2 B3GNTL1 ASPSCR1 DUS1L MCRIP1 LOC101929552 LOC101929511 CD7 STRA13 NPB RAB40B LOC105376790 TEX19 LOC105371944 CSNK1D PCYT2 MIR6787 MAFG SIRT7 CCDC57 SLC16A3 MAFG-AS1 P4HB ZNF750 PPP1R27 FASN LOC105376791 NARF DCXR WDR45B METRNL HEXDC RAC3 FN3KRP

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding