Hs07495613_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82676126 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_017024042.1			XP_016879531.1
	AB209711.1			BAD92948.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	METRNL LOC105371944 LOC105376791 LOC101929552 B3GNTL1 ZNF750 WDR45B MIR4525 FOXK2 FN3K TBCD RAB40B FN3KRP
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	LOC105376791 MIR4525 LOC101929552 FN3K TBCD ZNF750 RAB40B FN3KRP
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	WDR45B MIR4525 FOXK2 RAB40B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	WDR45B HEXDC MIR4525 C17orf62 FOXK2 OGFOD3 NARF RAB40B
nsv952395	Chr.17:82663725 - 82745024 on Build GRCh38	Deletion	LOC105376791 MIR4525 LOC101929552 FN3K RAB40B FN3KRP
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	CCDC57 MIR6787 ANAPC11 LOC101929552 MCRIP1 C17orf62 DUS1L SIRT7 AATK-AS1 MYADML2 CEP131 HGS P4HB ARL16 FSCN2 NPLOC4 SLC25A10 PDE6G RAB40B LINC00482 FASN LOC105371944 ASPSCR1 LOC105371925 CSNK1D LOC101929511 DCXR MAFG-AS1 HEXDC TMEM105 FOXK2 NPB TBCD LOC100130370 NARF MIR3186 NOTUM FN3KRP SLC16A3 PYCR1 GCGR BAHCC1 TEX19 AATK OXLD1 RFNG CD7 FAAP100 RAC3 ACTG1 STRA13 WDR45B ALYREF MIR6786 OGFOD3 FN3K SECTM1 C17orf89 SLC38A10 UTS2R TSPAN10 LOC105376791 LRRC45 TEPSIN GPS1 B3GNTL1 ZNF750 CCDC137 SNORD134 ARHGDIA MIR4525 MRPL12 LOC105376790 MAFG PPP1R27 PCYT2 MIR4740
nsv509680	Chr.17:82661313 - 82679596 on Build GRCh38	Insertion	MIR4525 RAB40B
esv2716519	Chr.17:82676081 - 82676542 on Build GRCh38	Deletion	RAB40B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	TEX19 LOC105376791 CD7 LOC101929552 C17orf62 CSNK1D LOC101929511 ZNF750 WDR45B HEXDC MIR4525 LOC105376790 FOXK2 OGFOD3 FN3K TBCD NARF SECTM1 RAB40B FN3KRP UTS2R
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	CCDC57 MIR6787 ANAPC11 LOC101929552 MCRIP1 C17orf62 DUS1L SIRT7 MYADML2 P4HB RAB40B METRNL FASN LOC105371944 ASPSCR1 CSNK1D LOC101929511 DCXR MAFG-AS1 HEXDC FOXK2 NPB TBCD NARF NOTUM FN3KRP SLC16A3 PYCR1 TEX19 RFNG CD7 RAC3 STRA13 WDR45B ALYREF OGFOD3 FN3K SECTM1 UTS2R LOC105376791 LRRC45 GPS1 B3GNTL1 ZNF750 SNORD134 ARHGDIA MIR4525 LOC105376790 MAFG PPP1R27 PCYT2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding