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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81888625 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07501731_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1
BU624466.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ARHGDIA P4HB ALYREF
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion STRA13 MAFG-AS1 ANAPC11 MAFG GPS1 LRRC45 PCYT2 PYCR1 ALYREF RFNG SIRT7 NPB MYADML2 DCXR ASPSCR1 DUS1L NOTUM RAC3
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain MAFG-AS1 GCGR GPS1 FASN OGFOD3 ACTG1 LOC105376790 CSNK1D DCXR HEXDC NOTUM ZNF750 CCDC137 RAB40B RAC3 TMEM105 OXLD1 HGS TSPAN10 AATK MIR3186 CEP131 FN3KRP FSCN2 SECTM1 MIR6786 C17orf62 MIR4525 LRRC45 C17orf89 SIRT7 TBCD LOC105376791 LOC105371944 SLC16A3 BAHCC1 CD7 P4HB ARL16 TEPSIN LOC105371925 B3GNTL1 WDR45B LOC101929552 NARF STRA13 NPLOC4 ANAPC11 MAFG AATK-AS1 PYCR1 CCDC57 FAAP100 NPB FOXK2 PPP1R27 MIR4740 MYADML2 LINC00482 ARHGDIA LOC101929511 SNORD134 ASPSCR1 DUS1L UTS2R MCRIP1 SLC38A10 PDE6G LOC100130370 PCYT2 ALYREF RFNG MRPL12 SLC25A10 TEX19 FN3K MIR6787
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss STRA13 MAFG-AS1 NPLOC4 GCGR ANAPC11 MAFG GPS1 PYCR1 FAAP100 NPB PPP1R27 MYADML2 ARHGDIA DCXR ASPSCR1 DUS1L NOTUM CCDC137 RAC3 MCRIP1 OXLD1 HGS TSPAN10 FSCN2 MIR6786 PDE6G LRRC45 PCYT2 ALYREF RFNG SIRT7 MRPL12 SLC25A10 P4HB ARL16
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss MAFG-AS1 ANAPC11 MAFG PCYT2 PYCR1 ALYREF SIRT7 NPB MYADML2 ARHGDIA ASPSCR1 P4HB NOTUM
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss MAFG-AS1 GPS1 FASN OGFOD3 LOC105376790 METRNL CSNK1D DCXR HEXDC NOTUM ZNF750 RAB40B RAC3 FN3KRP SECTM1 C17orf62 MIR4525 LRRC45 SIRT7 TBCD LOC105376791 LOC105371944 SLC16A3 CD7 P4HB B3GNTL1 WDR45B LOC101929552 NARF STRA13 ANAPC11 MAFG PYCR1 CCDC57 NPB FOXK2 PPP1R27 MYADML2 ARHGDIA LOC101929511 SNORD134 ASPSCR1 DUS1L UTS2R MCRIP1 PCYT2 ALYREF RFNG TEX19 FN3K MIR6787

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