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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81888814 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07501756_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1
BU624466.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain P4HB ALYREF ARHGDIA
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion STRA13 ANAPC11 LRRC45 MYADML2 RAC3 NPB ASPSCR1 PCYT2 MAFG DUS1L ALYREF GPS1 NOTUM PYCR1 MAFG-AS1 DCXR RFNG SIRT7
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain STRA13 ZNF750 LOC100130370 LRRC45 FSCN2 MIR6786 SLC25A10 RAC3 LOC105376790 NPLOC4 PDE6G P4HB ALYREF UTS2R SECTM1 OGFOD3 C17orf62 LOC105371925 MIR4525 TEX19 AATK-AS1 C17orf89 GCGR SLC38A10 NPB SNORD134 CSNK1D B3GNTL1 DUS1L AATK TSPAN10 LOC105371944 ARHGDIA TMEM105 RFNG MIR3186 SIRT7 CD7 TEPSIN LOC101929552 CCDC137 PCYT2 LOC101929511 LINC00482 HEXDC OXLD1 GPS1 FOXK2 NOTUM MIR4740 MRPL12 MAFG-AS1 CEP131 FASN LOC105376791 ARL16 FAAP100 FN3K TBCD ANAPC11 FN3KRP PPP1R27 MYADML2 ASPSCR1 MAFG MIR6787 RAB40B WDR45B CCDC57 SLC16A3 NARF ACTG1 PYCR1 HGS DCXR BAHCC1 MCRIP1
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss STRA13 LRRC45 FSCN2 MIR6786 SLC25A10 RAC3 NPLOC4 CCDC137 PCYT2 PDE6G P4HB OXLD1 ALYREF GPS1 NOTUM MRPL12 MAFG-AS1 ARL16 FAAP100 ANAPC11 PPP1R27 MYADML2 GCGR NPB ASPSCR1 MAFG DUS1L TSPAN10 PYCR1 HGS DCXR ARHGDIA RFNG MCRIP1 SIRT7
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss ANAPC11 MYADML2 NPB ASPSCR1 PCYT2 MAFG P4HB ALYREF NOTUM PYCR1 MAFG-AS1 ARHGDIA SIRT7
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss STRA13 ZNF750 LRRC45 RAC3 LOC105376790 P4HB ALYREF UTS2R SECTM1 OGFOD3 C17orf62 MIR4525 TEX19 NPB SNORD134 CSNK1D B3GNTL1 DUS1L LOC105371944 ARHGDIA RFNG SIRT7 CD7 LOC101929552 PCYT2 LOC101929511 HEXDC GPS1 FOXK2 NOTUM MAFG-AS1 FASN LOC105376791 FN3K TBCD ANAPC11 FN3KRP PPP1R27 MYADML2 ASPSCR1 MAFG MIR6787 RAB40B WDR45B CCDC57 SLC16A3 METRNL NARF PYCR1 DCXR MCRIP1

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