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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81890206 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502935_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ALYREF ANAPC11
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ALYREF ARHGDIA P4HB
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion NOTUM RAC3 DCXR PCYT2 NPB DUS1L PYCR1 MAFG-AS1 GPS1 ALYREF RFNG MYADML2 MAFG ANAPC11 SIRT7 LRRC45 STRA13 ASPSCR1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain RAC3 LOC100130370 CSNK1D ALYREF RFNG SLC25A10 FSCN2 CCDC137 FOXK2 UTS2R MIR6786 TBCD OXLD1 AATK B3GNTL1 TSPAN10 SNORD134 LOC101929511 ARL16 C17orf89 NPLOC4 TMEM105 LOC105376790 PDE6G MYADML2 MAFG LOC101929552 ANAPC11 P4HB MIR6787 BAHCC1 LOC105371944 NOTUM MIR4740 SLC38A10 ARHGDIA LOC105371925 ZNF750 PCYT2 GCGR DUS1L PYCR1 CCDC57 MAFG-AS1 TEPSIN SLC16A3 HEXDC TEX19 MIR4525 LINC00482 LRRC45 CD7 LOC105376791 FN3K C17orf62 FASN FAAP100 CEP131 AATK-AS1 ACTG1 PPP1R27 OGFOD3 WDR45B DCXR NPB MRPL12 RAB40B GPS1 MIR3186 FN3KRP MCRIP1 SIRT7 SECTM1 NARF HGS STRA13 ASPSCR1
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss NOTUM RAC3 ARHGDIA PCYT2 GCGR DUS1L PYCR1 MAFG-AS1 ALYREF RFNG SLC25A10 FSCN2 CCDC137 MIR6786 LRRC45 OXLD1 TSPAN10 FAAP100 ARL16 PPP1R27 NPLOC4 DCXR NPB MRPL12 GPS1 PDE6G MYADML2 MAFG ANAPC11 MCRIP1 SIRT7 P4HB HGS STRA13 ASPSCR1
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss NOTUM ARHGDIA PCYT2 NPB PYCR1 MAFG-AS1 ALYREF MYADML2 MAFG ANAPC11 SIRT7 P4HB ASPSCR1
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss RAC3 CSNK1D ALYREF RFNG FOXK2 UTS2R TBCD B3GNTL1 SNORD134 LOC101929511 LOC105376790 MYADML2 MAFG LOC101929552 ANAPC11 P4HB MIR6787 LOC105371944 NOTUM ARHGDIA ZNF750 PCYT2 DUS1L PYCR1 CCDC57 MAFG-AS1 SLC16A3 HEXDC TEX19 MIR4525 LRRC45 CD7 LOC105376791 FN3K C17orf62 FASN PPP1R27 OGFOD3 WDR45B DCXR NPB RAB40B GPS1 FN3KRP MCRIP1 SIRT7 SECTM1 NARF STRA13 ASPSCR1 METRNL

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