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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81887903 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07503341_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 6 1029 NP_005773.3
AF047002.1 6 930 AAD09608.1
AF086513.1 5 684
BC052302.1 6 1029 AAH52302.1
BU624466.1 1 85

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ALYREF ANAPC11
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ALYREF ARHGDIA P4HB
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion MAFG STRA13 PYCR1 ASPSCR1 NOTUM SIRT7 PCYT2 NPB DCXR MAFG-AS1 RAC3 ALYREF MYADML2 RFNG DUS1L LRRC45 ANAPC11 GPS1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain OGFOD3 MIR3186 OXLD1 BAHCC1 DCXR LINC00482 ARHGDIA P4HB AATK CCDC57 LOC101929511 CEP131 NOTUM CCDC137 PCYT2 PDE6G LOC101929552 FN3K ALYREF SECTM1 FN3KRP LOC105376791 LOC100130370 SLC38A10 CSNK1D MIR6786 LRRC45 ZNF750 AATK-AS1 RAB40B HGS MAFG TEX19 ASPSCR1 TSPAN10 SIRT7 SNORD134 NPLOC4 CD7 TMEM105 FSCN2 NPB UTS2R FAAP100 SLC16A3 WDR45B PPP1R27 MAFG-AS1 RAC3 TEPSIN FASN C17orf89 TBCD RFNG SLC25A10 MCRIP1 MIR4525 FOXK2 MRPL12 STRA13 GCGR PYCR1 LOC105371925 ACTG1 LOC105376790 MIR6787 B3GNTL1 LOC105371944 ARL16 HEXDC NARF MIR4740 MYADML2 DUS1L ANAPC11 GPS1 C17orf62
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss HGS MAFG ASPSCR1 TSPAN10 SIRT7 NPLOC4 OXLD1 FSCN2 NPB DCXR FAAP100 PPP1R27 MAFG-AS1 RAC3 ARHGDIA RFNG SLC25A10 MCRIP1 P4HB MRPL12 STRA13 GCGR PYCR1 NOTUM CCDC137 PCYT2 PDE6G ARL16 ALYREF MYADML2 DUS1L MIR6786 LRRC45 ANAPC11 GPS1
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss MAFG PYCR1 ASPSCR1 NOTUM SIRT7 PCYT2 NPB MAFG-AS1 ALYREF ARHGDIA MYADML2 P4HB ANAPC11
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss OGFOD3 DCXR ARHGDIA P4HB CCDC57 LOC101929511 NOTUM PCYT2 LOC101929552 METRNL FN3K ALYREF SECTM1 FN3KRP LOC105376791 CSNK1D LRRC45 ZNF750 RAB40B MAFG TEX19 ASPSCR1 SIRT7 SNORD134 CD7 NPB UTS2R SLC16A3 WDR45B PPP1R27 MAFG-AS1 RAC3 FASN TBCD RFNG MCRIP1 MIR4525 FOXK2 STRA13 PYCR1 LOC105376790 MIR6787 B3GNTL1 LOC105371944 HEXDC NARF MYADML2 DUS1L ANAPC11 GPS1 C17orf62

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