Hs07536056_cn

• Gene Symbol: GACAT2
• Assay Reference Genome Location: Chr.18:8706629 on build GRCh38
• Cytoband: 18p11.22

Target Gene Details

• Entrez Gene ID: 100287082
• Gene Name: gastric cancer associated transcript 2 (non-protein coding)
• Gene Aliases: MTCL1-AS1, MTCL1AS1
• Location: Chr.18:8695856-8707621 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GACAT2	NR_120598.1
	BM717007.1
	BQ026945.1

Target Gene Details

• Entrez Gene ID: 23255
• Gene Name: microtubule crosslinking factor 1
• Gene Aliases: CCDC165, KIAA0802, SOGA2
• Location: Chr.18:8705576-8832777 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MTCL1	XM_005258098.3	1	1054	XP_005258155.1
	XM_005258099.4	1	1054	XP_005258156.1
	XM_011525640.2	1	1054	XP_011523942.1
	XM_011525641.2	1	1054	XP_011523943.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv23442	Chr.18:8704955 - 8706815 on Build GRCh38	Loss	MTCL1 GACAT2
dgv5843n54	Chr.18:8701637 - 8706759 on Build GRCh38	Loss	MTCL1 GACAT2
dgv5844n54	Chr.18:8705082 - 8706635 on Build GRCh38	Loss	MTCL1 GACAT2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

microtubule bundle formation
regulation of autophagy
establishment or maintenance of epithelial cell apical/basal polarity
positive regulation of protein targeting to membrane
positive regulation of microtubule motor activity

Function(s)

microtubule binding
protein homodimerization activity
poly(A) RNA binding