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See other NFKBIL1 CNV Assays ›
Gene Symbol
NFKBIL1
Assay Reference Genome
Location

Chr.6:31557817 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00007206_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4795

Gene Name:

 NFKB inhibitor like 1

Gene Aliases:

 IKBL, LST1, NFKBIL

Location:

 Chr.6:31546851-31558829 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 4 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NFKBIL1 NM_001144961.1 NP_001138433.1
NM_001144962.1 NP_001138434.1
NM_001144963.1 NP_001138435.1
NM_005007.3 NP_004998.3
AF097419.1 AAD38108.1
AF097420.1 AAD38109.1
AF097421.1 AAD38110.1
AF097422.1 AAD38111.1
AF097423.1 AAD38112.1
AF097424.1 AAD38113.1
AF097425.1 AAD38114.1
AF097426.1 AAD38115.1
AF097427.1 AAD38116.1
AF097428.1 AAD38117.1
AF097429.1 AAD38118.1
AK291893.1
AK300818.1
AK313888.1
BC105064.1 AAI05065.1
BC105068.1 AAI05069.1
BC143671.1
BM044744.1
DC370256.1
X77909.1 CAA54867.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss ATP6V1G2-DDX39B CDSN DDX39B-AS1 LTA HCP5 CCHCR1 PSORS1C3 HLA-C HCG26 SNORD84 MCCD1 LOC100287329 SNORD117 PSORS1C1 TCF19 ATP6V1G2 DDX39B PSORS1C2 MICB NFKBIL1 C6orf15 LOC102725068 MICA HCG27 HLA-B POU5F1 MIR6891
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion ATP6V1G2-DDX39B HCP5 SAPCD1-AS1 ZBTB12 VARS SNORD52 NEU1 NELFE AIF1 SNORD84 NCR3 HSPA1A LY6G6F PRRT1 HSPA1B HLA-DRB1 SNORD117 DDAH2 TNXA MIR6833 ATP6V1G2 SLC44A4 HLA-DRB6 C6orf10 HCG23 LOC102725068 SKIV2L LTB SAPCD1 PPT2 LOC101929163 LY6G6E FKBPL AGPAT1 HLA-DRA SNORD48 ABHD16A DDX39B-AS1 PRRC2A C4A LTA CFB MIR6721 LY6G5C EHMT2 PBX2 LY6G6C TNF HCG26 MCCD1 C6orf25 BTNL2 LOC100287329 CLIC1 NOTCH4 SNORA38 APOM HSPA1L MIR4646 AGER EGFL8 CSNK2B CYP21A1P C2 LY6G5B BAG6 C6orf48 LST1 DDX39B ATF6B MIR1236 GPANK1 MICB MSH5-SAPCD1 C6orf47 NFKBIL1 VWA7 MIR6832 GPSM3 TNXB CYP21A2 STK19 HLA-DRB5 DXO C2-AS1 PPT2-EGFL8 RNF5 LY6G6D C4B LOC100507547 LSM2 MSH5
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PHF1 PSMB8-AS1 BRD2 HLA-DMB ATP6V1G2-DDX39B SLC39A7 HCP5 ZBTB12 LOC100294145 SNORD84 PRRT1 HLA-DRB1 B3GALT4 MIR5004 DDAH2 TNXA SLC44A4 LOC102725068 SKIV2L LTB MIR6834 PPT2 LOC101929163 FKBPL SNORD48 ABHD16A DDX39B-AS1 TAP2 LTA WDR46 HLA-DQB1-AS1 HSD17B8 CFB RPS18 KIFC1 COL11A2 LY6G6C TNF HCG26 MCCD1 BTNL2 LOC100287329 CLIC1 NOTCH4 SNORA38 AGER CYP21A1P C2 BAG6 C6orf48 ATF6B ZBTB9 SYNGAP1 MIR3135B GPANK1 MICB HCG24 C6orf47 HLA-DPA1 MIR6832 TNXB CYP21A2 RNF5 LY6G6D LSM2 HLA-DQA1 PSMB8 HLA-DPB1 HLA-DMA MIR6873 HCG25 SAPCD1-AS1 VARS ZBTB22 SNORD52 NEU1 NELFE AIF1 NCR3 HSPA1A LY6G6F RXRB DAXX HSPA1B HLA-DQB2 TAPBP SNORD117 MIR6833 ATP6V1G2 RING1 HLA-DRB6 C6orf10 HCG23 SAPCD1 HLA-DQB1 MIR219A1 LY6G6E AGPAT1 TAP1 HLA-DRA HLA-DQA2 HLA-DOB PRRC2A PPP1R2P1 C4A PSMB9 MIR6721 LY6G5C EHMT2 PBX2 C6orf25 HLA-DOA HLA-DPB2 APOM HSPA1L MIR4646 EGFL8 CSNK2B LY6G5B LST1 DDX39B MIR1236 MSH5-SAPCD1 PFDN6 VPS52 NFKBIL1 VWA7 CUTA GPSM3 STK19 HLA-DRB5 DXO C2-AS1 PPT2-EGFL8 RGL2 C4B LOC100507547 MSH5
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss ATP6V1G2-DDX39B HCP5 SAPCD1-AS1 ZBTB12 VARS SNORD52 NEU1 NELFE AIF1 SNORD84 NCR3 HSPA1A LY6G6F HSPA1B SNORD117 DDAH2 TNXA ATP6V1G2 SLC44A4 LOC102725068 MICA SKIV2L LTB SAPCD1 LY6G6E SNORD48 ABHD16A DDX39B-AS1 PRRC2A C4A LTA CFB LY6G5C EHMT2 LY6G6C TNF HCG26 MCCD1 C6orf25 LOC100287329 CLIC1 SNORA38 APOM HSPA1L MIR4646 CSNK2B CYP21A1P C2 LY6G5B BAG6 C6orf48 LST1 DDX39B MIR1236 GPANK1 MICB MSH5-SAPCD1 C6orf47 NFKBIL1 VWA7 MIR6832 TNXB CYP21A2 HLA-B STK19 DXO C2-AS1 MIR6891 LY6G6D C4B LSM2 MSH5
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PHF1 PSMB8-AS1 BRD2 HLA-DMB ATP6V1G2-DDX39B SLC39A7 HCP5 ZBTB12 LOC100294145 SNORD84 PRRT1 HLA-DRB1 B3GALT4 MIR5004 DDAH2 TNXA SLC44A4 LOC102725068 SKIV2L LTB MIR6834 PPT2 LOC101929163 FKBPL SNORD48 ABHD16A DDX39B-AS1 TAP2 LTA WDR46 HLA-DQB1-AS1 HSD17B8 CFB RPS18 KIFC1 COL11A2 LY6G6C TNF HCG26 MCCD1 BTNL2 LOC100287329 CLIC1 NOTCH4 SNORA38 AGER CYP21A1P C2 BAG6 C6orf48 ATF6B ZBTB9 SYNGAP1 MIR3135B GPANK1 MICB HCG24 C6orf47 HLA-DPA1 MIR6832 TNXB CYP21A2 RNF5 LY6G6D LSM2 HLA-DQA1 PSMB8 HLA-DPB1 HLA-DMA MIR6873 HCG25 SAPCD1-AS1 VARS ZBTB22 SNORD52 NEU1 NELFE AIF1 NCR3 HSPA1A LY6G6F RXRB DAXX HSPA1B HLA-DQB2 TAPBP SNORD117 MIR6833 ATP6V1G2 RING1 HLA-DRB6 C6orf10 HCG23 SAPCD1 HLA-DQB1 MIR219A1 LY6G6E AGPAT1 TAP1 HLA-DRA HLA-DQA2 HLA-DOB PRRC2A PPP1R2P1 C4A PSMB9 MIR6721 LY6G5C EHMT2 PBX2 C6orf25 HLA-DOA HLA-DPB2 APOM HSPA1L MIR4646 EGFL8 CSNK2B LY6G5B LST1 DDX39B MIR1236 MSH5-SAPCD1 PFDN6 VPS52 NFKBIL1 VWA7 CUTA GPSM3 STK19 HLA-DRB5 DXO C2-AS1 PPT2-EGFL8 RGL2 C4B LOC100507547 MSH5
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss SNORD117 NFKBIL1 ATP6V1G2-DDX39B TNF DDX39B-AS1 SNORD84 MCCD1 ATP6V1G2 DDX39B LTA LOC100287329
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss ATP6V1G2-DDX39B HCP5 SAPCD1-AS1 ZBTB12 VARS SNORD52 NEU1 NELFE AIF1 SNORD84 NCR3 HSPA1A LY6G6F PRRT1 HSPA1B SNORD117 DDAH2 TNXA MIR6833 ATP6V1G2 SLC44A4 C6orf10 HCG23 LOC102725068 MICA SKIV2L LTB SAPCD1 PPT2 LOC101929163 LY6G6E FKBPL AGPAT1 HLA-DRA SNORD48 ABHD16A DDX39B-AS1 PRRC2A C4A LTA CFB MIR6721 LY6G5C EHMT2 PBX2 LY6G6C TNF HCG26 MCCD1 C6orf25 BTNL2 LOC100287329 CLIC1 NOTCH4 SNORA38 APOM HSPA1L MIR4646 AGER EGFL8 CSNK2B CYP21A1P C2 LY6G5B BAG6 C6orf48 LST1 DDX39B ATF6B MIR1236 GPANK1 MICB MSH5-SAPCD1 C6orf47 NFKBIL1 VWA7 MIR6832 GPSM3 TNXB CYP21A2 HLA-B STK19 DXO C2-AS1 PPT2-EGFL8 RNF5 MIR6891 LY6G6D C4B LOC100507547 LSM2 MSH5
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss ATP6V1G2-DDX39B ABHD16A DDX39B-AS1 PRRC2A LTA LY6G5C TNF AIF1 SNORD84 MCCD1 NCR3 LOC100287329 SNORA38 SNORD117 APOM CSNK2B LY6G5B BAG6 ATP6V1G2 LST1 DDX39B GPANK1 C6orf47 NFKBIL1 MIR6832 LTB

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