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See other FANCA CNV Assays ›
Gene Symbol
FANCA
Assay Reference Genome
Location

Chr.16:89746617 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00085736_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Online offer: 441.65
441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 2175

Gene Name:

 Fanconi anemia complementation group A

Gene Aliases:

 FA, FA-H, FA1, FAA, FACA, FAH, FANCH

Location:

 Chr.16:89737551-89816658 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 37 - Exon 37
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FANCA NM_000135.2 NP_000126.2
NM_001286167.1 NP_001273096.1
XM_005256294.4 XP_005256351.1
XM_011522945.2 XP_011521247.1
XM_011522946.2 XP_011521248.1
XM_011522947.2 XP_011521249.1
XM_017023044.1 XP_016878533.1
AK299282.1
AK301168.1
X99226.1 CAA67610.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1931 Chr.16:89713649 - 89746701 on Build GRCh38 Insertion ZNF276 VPS9D1-AS1 FANCA VPS9D1
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss ZNF276 LOC107984817 SPIRE2 FANCA LOC105371419 TCF25
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion CDK10 ZNF276 VPS9D1-AS1 SPATA2L FANCA VPS9D1
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain CDK10 ZNF276 VPS9D1-AS1 SPATA2L LOC107984817 SPIRE2 SPATA33 FANCA LOC105371419 VPS9D1
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss CDK10 ZNF276 VPS9D1-AS1 CENPBD1 SPATA2L GAS8 LOC107984817 CHMP1A AFG3L1P DBNDD1 SPATA33 VPS9D1 GAS8-AS1 MC1R DPEP1 TUBB3 SPIRE2 FANCA LOC105371419 TCF25 DEF8
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF276 ANKRD11 VPS9D1-AS1 SPATA2L URAHP DBNDD1 CPNE7 SPG7 VPS9D1 DPEP1 TUBB3 SPIRE2 LOC101927817 LOC105371419 TCF25 PRDM7 DEF8 CDK10 SNORD68 CENPBD1 GAS8 LOC107984817 CHMP1A AFG3L1P SPATA33 RPL13 TUBB8P7 GAS8-AS1 MC1R LOC100287036 FANCA FAM157C LOC105371414 ZNF778
nsv833331 Chr.16:89726091 - 89849806 on Build GRCh38 Gain+Loss ZNF276 LOC107984817 SPIRE2 FANCA LOC105371419
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MIR4722 ZNF276 VPS9D1-AS1 SPATA2L LOC107987238 URAHP DBNDD1 CPNE7 VPS9D1 TUBB3 LOC101927817 LOC105371419 PRDM7 LOC400558 SNORD68 GALNS AFG3L1P RPL13 TUBB8P7 MVD GAS8-AS1 TRAPPC2L LOC100287036 IL17C CDH15 CDT1 FAM157C SLC22A31 LOC105371414 ZNF778 LINC00304 ANKRD11 LOC101927793 SPG7 LOC100289580 CTU2 DPEP1 APRT PABPN1L SPIRE2 TCF25 PIEZO1 LOC105371409 SNAI3-AS1 DEF8 CDK10 CENPBD1 GAS8 LOC107984817 CHMP1A SPATA33 RNF166 LOC339059 SNAI3 MC1R ACSF3 FANCA CYBA CBFA2T3 LOC100129697
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CDK10 SNORD68 ZNF276 VPS9D1-AS1 SPATA2L CHMP1A CPNE7 SPATA33 RPL13 SPG7 VPS9D1 DPEP1 FANCA

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