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Gene Symbol
SLC12A6
Assay Reference Genome
Location

Chr.15:34240772 on build GRCh38
Cytoband
15q14
Assay ID Hs00110706_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9990

Gene Name:

 solute carrier family 12 member 6

Gene Aliases:

 ACCPN, KCC3, KCC3A, KCC3B

Location:

 Chr.15:34229996-34338064 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 19 - Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A6 NM_001042494.1 NP_001035959.1
NM_001042495.1 NP_001035960.1
NM_001042496.1 NP_001035961.1
NM_001042497.1 NP_001035962.1
NM_005135.2 NP_005126.1
NM_133647.1 NP_598408.1
XM_006720793.3 XP_006720856.1
AF105366.1 AAD39742.1
AF108831.1 AAD25337.1
AF116242.1 AAF24986.1
AF477977.1 AAL85335.1
AF531258.1 AAQ10026.1
AF531259.1 AAQ10027.1
AF531260.1 AAQ10028.1
AK128133.1
AK292550.1
AK315283.1
AL117500.1 CAB55965.1
BC051744.1 AAH51744.1
BC070107.1
BC126241.1
BC126243.1
BX648195.1 CAI46042.1
DQ138323.1 ABA02873.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3636106 Chr.15:34238802 - 34242941 on Build GRCh38 Gain SLC12A6
esv2659969 Chr.15:34239070 - 34242993 on Build GRCh38 Deletion SLC12A6
nsv1052620 Chr.15:32612402 - 34538731 on Build GRCh38 Gain RYR3 LOC105370757 ARHGAP11A MIR1233-2 SLC12A6 FMN1 EMC7 GOLGA8A AVEN LOC101928042 PGBD4 CHRM5 GOLGA8B EMC4 MIR1233-1 LOC101928134 NOP10 KATNBL1 TMCO5B SCG5 NUTM1 LOC100131315 LPCAT4 GREM1
esv33337 Chr.15:31689863 - 34575097 on Build GRCh38 Gain+Loss RYR3 LOC105370757 ULK4P1 MIR1233-2 GOLGA8A AVEN LOC101928042 LOC100653133 GOLGA8N CHRM5 GOLGA8K LOC105370940 GOLGA8B MIR1233-1 LOC101928134 KATNBL1 TMCO5B WHAMMP1 NUTM1 ARHGAP11A SLC12A6 FMN1 EMC7 CHRNA7 PGBD4 LOC101060588 LOC100996255 EMC4 NOP10 GOLGA8O SCG5 LOC100131315 LPCAT4 GREM1
esv3569431 Chr.15:33564570 - 35080307 on Build GRCh38 Gain RYR3 MIR1233-2 SLC12A6 ZNF770 EMC7 GOLGA8A AVEN PGBD4 CHRM5 GOLGA8B EMC4 MIR1233-1 NOP10 KATNBL1 AQR ACTC1 NUTM1 LPCAT4 LOC101928174 GJD2
dgv4456n54 Chr.15:32604149 - 34557061 on Build GRCh38 Gain RYR3 LOC105370757 MIR1233-2 GOLGA8A AVEN LOC101928042 GOLGA8N CHRM5 GOLGA8B MIR1233-1 LOC101928134 KATNBL1 TMCO5B NUTM1 ARHGAP11A SLC12A6 FMN1 EMC7 PGBD4 EMC4 NOP10 SCG5 LOC100131315 LPCAT4 GREM1

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