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See other NFKBIL1 CNV Assays ›
Gene Symbol
NFKBIL1
Assay Reference Genome
Location

Chr.6:31558258 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00114285_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4795

Gene Name:

 NFKB inhibitor like 1

Gene Aliases:

 IKBL, LST1, NFKBIL

Location:

 Chr.6:31546851-31558829 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NFKBIL1 NM_001144961.1 4 867 NP_001138433.1
NM_001144962.1 4 859 NP_001138434.1
NM_001144963.1 4 814 NP_001138435.1
NM_005007.3 4 912 NP_004998.3
AF097419.1 4 795 AAD38108.1
AF097420.1 4 795 AAD38109.1
AF097421.1 4 795 AAD38110.1
AF097422.1 4 795 AAD38111.1
AF097423.1 4 795 AAD38112.1
AF097424.1 4 795 AAD38113.1
AF097425.1 4 795 AAD38114.1
AF097426.1 4 795 AAD38115.1
AF097427.1 4 795 AAD38116.1
AF097428.1 4 795 AAD38117.1
AF097429.1 4 795 AAD38118.1
AK291893.1 4 912
AK300818.1 4 792
AK313888.1 4 847
BC105064.1 4 850 AAI05065.1
BC105068.1 4 850 AAI05069.1
BC143671.1 4 805
X77909.1 4 861 CAA54867.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss CCHCR1 ATP6V1G2 POU5F1 LTA CDSN HCG27 MICA MCCD1 SNORD84 C6orf15 SNORD117 HCG26 PSORS1C3 HLA-C MIR6891 HLA-B DDX39B LOC102725068 NFKBIL1 PSORS1C1 LOC100287329 DDX39B-AS1 PSORS1C2 MICB HCP5 ATP6V1G2-DDX39B TCF19
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion HCG23 LTB NOTCH4 BTNL2 HSPA1L MSH5-SAPCD1 C6orf48 LTA EHMT2 PPT2-EGFL8 ZBTB12 LSM2 NELFE MCCD1 CSNK2B CLIC1 SKIV2L C2 PRRT1 BAG6 LY6G6E C6orf47 VWA7 PRRC2A DDX39B HSPA1B C6orf10 LOC101929163 C6orf25 DDAH2 LOC102725068 CYP21A1P SNORD52 ABHD16A LY6G5C HLA-DRB6 GPSM3 LY6G6C HCP5 NCR3 AGPAT1 TNXB VARS ATF6B ATP6V1G2 HLA-DRB1 FKBPL LY6G6D RNF5 LY6G6F CYP21A2 MIR6721 LOC100507547 APOM SLC44A4 C4A PBX2 LY6G5B GPANK1 TNF NEU1 SNORD84 MSH5 SNORD117 HCG26 SAPCD1 TNXA HLA-DRB5 PPT2 C4B MIR1236 AIF1 C2-AS1 MIR6833 SNORD48 CFB SAPCD1-AS1 LST1 HSPA1A NFKBIL1 MIR4646 AGER STK19 DXO LOC100287329 DDX39B-AS1 MICB MIR6832 ATP6V1G2-DDX39B SNORA38 EGFL8 HLA-DRA
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HCG23 NOTCH4 BTNL2 HSPA1L MIR6873 MSH5-SAPCD1 RXRB C6orf48 PSMB9 EHMT2 PPT2-EGFL8 ZBTB12 SYNGAP1 NELFE HLA-DQA2 CSNK2B CLIC1 WDR46 HSD17B8 PRRT1 PSMB8-AS1 LY6G6E C6orf47 VWA7 LOC102725068 CYP21A1P ABHD16A HLA-DRB6 GPSM3 LY6G6C HCP5 TNXB VARS B3GALT4 BRD2 ATP6V1G2 TAP2 KIFC1 HLA-DMA FKBPL RNF5 LY6G6F PFDN6 CYP21A2 MIR6721 LY6G5B NEU1 SNORD117 HCG26 MIR6834 SAPCD1 TNXA PPT2 MIR1236 HLA-DPA1 MIR6833 HLA-DOB CFB SAPCD1-AS1 HLA-DQB1 ZBTB22 NFKBIL1 HLA-DPB2 RING1 AGER STK19 HLA-DPB1 MIR3135B DXO DDX39B-AS1 HLA-DRA SLC39A7 PHF1 LTB LTA RGL2 LSM2 HLA-DQB1-AS1 MCCD1 SKIV2L C2 BAG6 PSMB8 MIR5004 PRRC2A DDX39B HSPA1B C6orf10 LOC101929163 C6orf25 DDAH2 HLA-DQA1 SNORD52 LY6G5C NCR3 AGPAT1 ATF6B TAP1 HLA-DRB1 LY6G6D RPS18 DAXX LOC100507547 APOM SLC44A4 C4A HCG24 PBX2 GPANK1 TNF SNORD84 MSH5 HLA-DQB2 MIR219A1 CUTA HLA-DRB5 COL11A2 PPP1R2P1 C4B AIF1 C2-AS1 HCG25 LOC100294145 SNORD48 ZBTB9 HLA-DOA HLA-DMB LST1 HSPA1A MIR4646 TAPBP VPS52 LOC100287329 MICB MIR6832 ATP6V1G2-DDX39B SNORA38 EGFL8
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LTB HSPA1L MSH5-SAPCD1 C6orf48 LTA EHMT2 ZBTB12 LSM2 NELFE MCCD1 CSNK2B CLIC1 SKIV2L C2 BAG6 MIR6891 LY6G6E C6orf47 VWA7 PRRC2A DDX39B HSPA1B C6orf25 DDAH2 LOC102725068 CYP21A1P SNORD52 ABHD16A LY6G5C LY6G6C HCP5 NCR3 TNXB VARS ATP6V1G2 LY6G6D LY6G6F CYP21A2 APOM SLC44A4 C4A MICA LY6G5B GPANK1 TNF NEU1 SNORD84 MSH5 SNORD117 HCG26 SAPCD1 TNXA HLA-B C4B MIR1236 AIF1 C2-AS1 SNORD48 CFB SAPCD1-AS1 LST1 HSPA1A NFKBIL1 MIR4646 STK19 DXO LOC100287329 DDX39B-AS1 MICB MIR6832 ATP6V1G2-DDX39B SNORA38
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HCG23 NOTCH4 BTNL2 HSPA1L MIR6873 MSH5-SAPCD1 RXRB C6orf48 PSMB9 EHMT2 PPT2-EGFL8 ZBTB12 SYNGAP1 NELFE HLA-DQA2 CSNK2B CLIC1 WDR46 HSD17B8 PRRT1 PSMB8-AS1 LY6G6E C6orf47 VWA7 LOC102725068 CYP21A1P ABHD16A HLA-DRB6 GPSM3 LY6G6C HCP5 TNXB VARS B3GALT4 BRD2 ATP6V1G2 TAP2 KIFC1 HLA-DMA FKBPL RNF5 LY6G6F PFDN6 CYP21A2 MIR6721 LY6G5B NEU1 SNORD117 HCG26 MIR6834 SAPCD1 TNXA PPT2 MIR1236 HLA-DPA1 MIR6833 HLA-DOB CFB SAPCD1-AS1 HLA-DQB1 ZBTB22 NFKBIL1 HLA-DPB2 RING1 AGER STK19 HLA-DPB1 MIR3135B DXO DDX39B-AS1 HLA-DRA SLC39A7 PHF1 LTB LTA RGL2 LSM2 HLA-DQB1-AS1 MCCD1 SKIV2L C2 BAG6 PSMB8 MIR5004 PRRC2A DDX39B HSPA1B C6orf10 LOC101929163 C6orf25 DDAH2 HLA-DQA1 SNORD52 LY6G5C NCR3 AGPAT1 ATF6B TAP1 HLA-DRB1 LY6G6D RPS18 DAXX LOC100507547 APOM SLC44A4 C4A HCG24 PBX2 GPANK1 TNF SNORD84 MSH5 HLA-DQB2 MIR219A1 CUTA HLA-DRB5 COL11A2 PPP1R2P1 C4B AIF1 C2-AS1 HCG25 LOC100294145 SNORD48 ZBTB9 HLA-DOA HLA-DMB LST1 HSPA1A MIR4646 TAPBP VPS52 LOC100287329 MICB MIR6832 ATP6V1G2-DDX39B SNORA38 EGFL8
nsv470809 Chr.6:31529138 - 31576412 on Build GRCh38 Loss NFKBIL1 DDX39B ATP6V1G2 LOC100287329 DDX39B-AS1 MCCD1 TNF SNORD84 ATP6V1G2-DDX39B LTA SNORD117
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss HCG23 LTB NOTCH4 BTNL2 HSPA1L MSH5-SAPCD1 C6orf48 LTA EHMT2 PPT2-EGFL8 ZBTB12 LSM2 NELFE MCCD1 CSNK2B CLIC1 SKIV2L C2 PRRT1 BAG6 MIR6891 LY6G6E C6orf47 VWA7 PRRC2A DDX39B HSPA1B C6orf10 LOC101929163 C6orf25 DDAH2 LOC102725068 CYP21A1P SNORD52 ABHD16A LY6G5C GPSM3 LY6G6C HCP5 NCR3 AGPAT1 TNXB VARS ATF6B ATP6V1G2 FKBPL LY6G6D RNF5 LY6G6F CYP21A2 MIR6721 LOC100507547 APOM SLC44A4 C4A MICA PBX2 LY6G5B GPANK1 TNF NEU1 SNORD84 MSH5 SNORD117 HCG26 SAPCD1 TNXA PPT2 HLA-B C4B MIR1236 AIF1 C2-AS1 MIR6833 SNORD48 CFB SAPCD1-AS1 LST1 HSPA1A NFKBIL1 MIR4646 AGER STK19 DXO LOC100287329 DDX39B-AS1 MICB MIR6832 ATP6V1G2-DDX39B SNORA38 EGFL8 HLA-DRA
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss LTB ATP6V1G2 LTA APOM MCCD1 LY6G5B GPANK1 TNF CSNK2B SNORD84 SNORD117 BAG6 C6orf47 PRRC2A DDX39B AIF1 LST1 NFKBIL1 ABHD16A LY6G5C LOC100287329 DDX39B-AS1 MIR6832 NCR3 ATP6V1G2-DDX39B SNORA38

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