Hs00157058_cn

• Gene Symbol: MGAT4C
• Assay Reference Genome Location: Chr.12:85980287 on build GRCh38
• Cytoband: 12q21.31

Target Gene Details

• Entrez Gene ID: 25834
• Gene Name: MGAT4 family member C
• Gene Aliases: GNTIVH, HGNT-IV-H
• Location: Chr.12:85972281-86838999 on Build GRCh38
• Assay Gene Location: Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MGAT4C	NM_013244.3	7	906	NP_037376.2
	XM_005268776.4	6	663	XP_005268833.1
	XM_005268779.3	5	1431	XP_005268836.1
	XM_011538150.2	6	730	XP_011536452.1
	XM_011538151.2	6	646	XP_011536453.1
	XM_011538156.2	9	1938	XP_011536458.1
	XM_011538157.2	8	2597	XP_011536459.1
	XM_017019143.1	6	1455	XP_016874632.1
	XM_017019144.1	6	636	XP_016874633.1
	XM_017019145.1	7	771	XP_016874634.1
	XM_017019146.1	7	768	XP_016874635.1
	XM_017019147.1	6	746	XP_016874636.1
	XM_017019148.1	8	1730	XP_016874637.1
	XM_017019149.1	7	1652	XP_016874638.1
	XM_017019150.1	8	1034	XP_016874639.1
	AK127727.1	8	1645
	AK299253.1	6	663
	BC026068.1	6	670	AAH26068.1
	BC064141.1	3	447	AAH64141.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv559667	Chr.12:85924226 - 86022434 on Build GRCh38	Loss	MGAT4C
nsv1049179	Chr.12:85662598 - 86405410 on Build GRCh38	Gain	MGAT4C RASSF9 NTS
esv3892241	Chr.12:85305039 - 88102633 on Build GRCh38	Gain	C12orf29 MGAT4C C12orf50 RASSF9 CEP290 LOC105369879 MKRN9P NTS
nsv797	Chr.12:85949715 - 85983671 on Build GRCh38	Insertion	MGAT4C

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

N-glycan processing

Function(s)

alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
metal ion binding