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System Message

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Gene Symbol: ITGA10
Assay Reference Genome Location: Chr.1:145892847 on build GRCh38
Cytoband: 1q21.1

Assay ID

Hs00187427_cn

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Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	8515
Gene Name:	integrin subunit alpha 10
Gene Aliases:	PRO827
Location:	Chr.1:145891208-145910189 on Build GRCh38
Assay Gene Location:	Overlaps Intron 28 - Exon 29

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ITGA10	NM_001303040.1			NP_001289969.1
	NM_001303041.1			NP_001289970.1
	NM_003637.4			NP_003628.2
	XM_005277436.3			XP_005277493.1
	XM_011510083.2			XP_011508385.1
	XM_011510084.1			XP_011508386.1
	XM_017002622.1			XP_016858111.1
	XM_017002623.1			XP_016858112.1
	XM_017002624.1			XP_016858113.1
	XM_017002625.1			XP_016858114.1
	XM_017002626.1			XP_016858115.1
	XM_017002628.1			XP_016858117.1
	AF074015.1			AAC31952.1
	AF112345.1			AAF21944.1
	AK304155.1
	AK304183.1
	AK314255.1
	BC140831.1
	BC144637.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1005055	Chr.1:145642988 - 148991068 on Build GRCh38	Loss	NBPF12 RNVU1-6 PDZK1P1 NBPF11 ANKRD34A GPR89B MIR6736 CH17-408M7.1 RNF115 LOC728989 MIR6077 CHD1L GNRHR2 HYDIN2 PPIAL4G RNVU1-7 POLR3GL LINC01138 PEX11B NUDT4P1 LINC00624 FMO5 RNVU1-3 GJA8 LOC105371226 LOC284561 ACP6 LOC105371242 RNVU1-1 PRKAB2 TXNIP PDIA3P1 LOC100505824 RBM8A ANKRD35 BCL9 NBPF10 HFE2 POLR3C LOC100996763 MIR5087 GPR89A NUDT4P2 RNU1-13P LOC101927468 LOC100996517 GJA5 NBPF14 NUDT17 NBPF13P LOC101928979 PDZK1 NOTCH2NL CD160 LIX1L ITGA10 RNVU1-8 LOC100132057 PIAS3 PDE4DIP
esv3587420	Chr.1:145824369 - 145905171 on Build GRCh38	Gain	POLR3C ANKRD35 NUDT17 MIR6736 ITGA10 PIAS3
nsv831381	Chr.1:145784568 - 145960930 on Build GRCh38	Gain	POLR3GL RBM8A PEX11B ANKRD35 NUDT17 ANKRD34A MIR6736 RNF115 POLR3C LIX1L ITGA10 PIAS3 GNRHR2

More Information

Set Membership:

Intragenic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

integrin

Gene Ontology Categories:

Function(s) Process(es)

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