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See other SLC38A3 CNV Assays ›
Gene Symbol
SLC38A3
Assay Reference Genome
Location

Chr.3:50217323 on build GRCh38
Cytoband
3p21.31
Assay ID Hs00190658_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10991

Gene Name:

 solute carrier family 38 member 3

Gene Aliases:

 G17, NAT1, SN1, SNAT3

Location:

 Chr.3:50205246-50220979 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC38A3 NM_006841.5 NP_006832.1
XM_006712954.2 XP_006713017.1
AF244548.1 AAG15313.1
AK293801.1
AK299677.1
AK313461.1
BC042875.1 AAH42875.1
BX537382.1 CAD97624.1
CR456970.1 CAG33251.1
U49082.1 AAB47236.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759148 Chr.3:50161045 - 50333946 on Build GRCh38 Loss HYAL3 SEMA3B-AS1 TUSC2 HYAL2 SEMA3B IFRD2 MIR6872 MIR5787 GNAT1 RASSF1 MIR566 HYAL1 LSMEM2 NAT6 SEMA3F GNAI2 SLC38A3
nsv523560 Chr.3:50134964 - 50314769 on Build GRCh38 Loss HYAL3 SEMA3B-AS1 SEMA3B IFRD2 MIR6872 MIR5787 SEMA3F-AS1 GNAT1 MIR566 HYAL1 LSMEM2 NAT6 LOC107986035 SEMA3F GNAI2 SLC38A3
dgv602n27 Chr.3:50140578 - 50287241 on Build GRCh38 Loss MIR566 LSMEM2 LOC107986035 SEMA3B-AS1 SEMA3F GNAI2 SLC38A3 SEMA3B MIR6872 MIR5787 SEMA3F-AS1 GNAT1
dgv8317n54 Chr.3:50206077 - 50383123 on Build GRCh38 Loss TMEM115 HYAL3 NPRL2 SEMA3B-AS1 TUSC2 HYAL2 SEMA3B IFRD2 CYB561D2 MIR6872 MIR5787 RASSF1 HYAL1 LSMEM2 ZMYND10 NAT6 CACNA2D2 GNAI2 SLC38A3 RASSF1-AS1
nsv834692 Chr.3:50161052 - 50356033 on Build GRCh38 Loss TMEM115 HYAL3 NPRL2 SEMA3B-AS1 TUSC2 HYAL2 SEMA3B IFRD2 CYB561D2 MIR6872 MIR5787 GNAT1 RASSF1 MIR566 HYAL1 LSMEM2 ZMYND10 NAT6 SEMA3F GNAI2 SLC38A3 RASSF1-AS1
dgv8316n54 Chr.3:50115923 - 50299991 on Build GRCh38 Loss RBM5 HYAL3 SEMA3B-AS1 SEMA3B IFRD2 MIR6872 MIR5787 SEMA3F-AS1 GNAT1 MIR566 HYAL1 LSMEM2 NAT6 LOC107986035 SEMA3F GNAI2 SLC38A3
nsv515986 Chr.3:50066874 - 50254353 on Build GRCh38 Loss MIR566 RBM5 RBM5-AS1 LOC107986035 RBM6 SEMA3F GNAI2 SLC38A3 MIR5787 SEMA3F-AS1 GNAT1
nsv470561 Chr.3:50121341 - 50547568 on Build GRCh38 Loss TMEM115 HYAL3 HYAL2 IFRD2 CYB561D2 MIR6872 RASSF1 MIR566 LSMEM2 LOC107986035 GNAI2 SLC38A3 NPRL2 SEMA3B-AS1 TUSC2 SEMA3B MIR5787 SEMA3F-AS1 GNAT1 HYAL1 ZMYND10 NAT6 CACNA2D2 SEMA3F RASSF1-AS1
nsv523662 Chr.3:50107518 - 50547568 on Build GRCh38 Loss TMEM115 RBM5 HYAL3 HYAL2 IFRD2 CYB561D2 MIR6872 RASSF1 MIR566 LSMEM2 LOC107986035 GNAI2 SLC38A3 NPRL2 SEMA3B-AS1 TUSC2 SEMA3B MIR5787 SEMA3F-AS1 GNAT1 HYAL1 ZMYND10 NAT6 CACNA2D2 SEMA3F RASSF1-AS1
nsv834690 Chr.3:50064402 - 50263192 on Build GRCh38 Loss MIR566 RBM5 RBM5-AS1 LOC107986035 RBM6 SEMA3F GNAI2 SLC38A3 MIR5787 SEMA3F-AS1 GNAT1
nsv590255 Chr.3:50210391 - 50399396 on Build GRCh38 Loss TMEM115 HYAL3 NPRL2 SEMA3B-AS1 TUSC2 HYAL2 SEMA3B IFRD2 CYB561D2 MIR6872 MIR5787 RASSF1 HYAL1 LSMEM2 ZMYND10 NAT6 CACNA2D2 GNAI2 SLC38A3 RASSF1-AS1
nsv954855 Chr.3:50152468 - 50439169 on Build GRCh38 Deletion TMEM115 HYAL3 HYAL2 IFRD2 CYB561D2 MIR6872 RASSF1 MIR566 LSMEM2 LOC107986035 GNAI2 SLC38A3 NPRL2 SEMA3B-AS1 TUSC2 SEMA3B MIR5787 SEMA3F-AS1 GNAT1 HYAL1 ZMYND10 NAT6 CACNA2D2 SEMA3F RASSF1-AS1

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