Hs00209940_cn

• Gene Symbol: SCN11A
• Assay Reference Genome Location: Chr.3:38846770 on build GRCh38
• Cytoband: 3p22.2

Target Gene Details

• Entrez Gene ID: 11280
• Gene Name: sodium voltage-gated channel alpha subunit 11
• Gene Aliases: FEPS3, HSAN7, NAV1.9, NaN, PN5, SCN12A, SNS-2
• Location: Chr.3:38845764-39051986 on Build GRCh38
• Assay Gene Location: Within Exon 36

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCN11A	NM_001287223.1	27	5330	NP_001274152.1
	NM_014139.2	26	5499	NP_054858.2
	XM_011533321.2	23	4724	XP_011531623.1
	XM_017005647.1	31	5951	XP_016861136.1
	XM_017005648.1	28	5432	XP_016861137.1
	XM_017005649.1	30	5829	XP_016861138.1
	XM_017005650.1	27	5630	XP_016861139.1
	XM_017005651.1	27	5156	XP_016861140.1
	XM_017005653.1	17	4108	XP_016861142.1
	AF109737.1	26	5499	AAF24976.1
	AF188679.1	27	5330	AAF17480.1
	AJ417790.1	26	5300	CAD10507.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3595916	Chr.3:38839386 - 38852617 on Build GRCh38	Gain	SCN11A

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

voltage-gated ion channel

Gene Ontology Categories:

Process(es)

sodium ion transport
neuronal action potential
regulation of ion transmembrane transport
sodium ion transmembrane transport
response to drug
regulation of sensory perception of pain
regulation of postsynaptic membrane potential
membrane depolarization during action potential

Function(s)

voltage-gated sodium channel activity