Hs00228746_cn

• Gene Symbol: PATL1
• Assay Reference Genome Location: Chr.11:59639079 on build GRCh38
• Cytoband: 11q12.1

Target Gene Details

• Entrez Gene ID: 219988
• Gene Name: PAT1 homolog 1, processing body mRNA decay factor
• Gene Aliases: Pat1b, hPat1b
• Location: Chr.11:59636716-59669040 on Build GRCh38
• Assay Gene Location: Within Exon 20

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PATL1	NM_152716.2	18	2403	NP_689929.2
	XM_005273833.4	18	3525	XP_005273890.1
	XM_005273834.1	17	2315	XP_005273891.1
	XM_011544811.2	14	1738	XP_011543113.1
	XM_017017339.1	19	2479	XP_016872828.1
	AB065087.1	3	302	BAB93524.1
	AK094193.1	15	1914	BAC04305.1
	AK127649.1	7	845
	AK127943.1	17	2162
	AL831992.2	18	2344	CAD89916.1
	BC065264.1	15	1897
	BC109038.1	15	1858	AAI09039.1
	BC109039.1	15	1858	AAI09040.1
	BC111047.1	16	2065	AAI11048.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv832172	Chr.11:59628934 - 59663642 on Build GRCh38	Loss	PATL1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

deadenylation-dependent decapping of nuclear-transcribed mRNA
cytoplasmic mRNA processing body assembly
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

RNA binding
protein binding
poly(U) RNA binding
poly(G) binding
poly(A) RNA binding