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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2056501 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00269175_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001803.1 XP_016857292.1
AK290995.1
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion GABRD PRKCZ LOC105378591
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC105378947 CFAP74 PLEKHN1 TMEM88B B3GALT6 LOC100132287 SKI LOC107985728 SLC35E2B SLC35E2 LOC102724312 NADK OR4F16 CPSF3L MXRA8 MIR200A MIR200B MORN1 LOC284600 LOC100287934 MIR6723 PERM1 FAM132A DVL1 LOC100288175 LOC105378591 MIR6727 TTLL10 AURKAIP1 AGRN SDF4 FAAP20 LOC105378589 FAM138A MIR6859-1 CDK11B DDX11L1 CDK11A TMEM52 LOC101928626 FNDC10 LOC729737 SAMD11 TNFRSF18 GNB1 ACAP3 LOC100129534 MIR6808 LOC107984841 MMP23B HES4 FAM87B TTLL10-AS1 MIR429 CPTP UBE2J2 MIR6859-2 C1orf159 LINC01342 VWA1 LOC148413 LINC01128 ATAD3B MTND2P28 LINC00115 RNF223 ISG15 NOC2L MMP23A SCNN1D PRKCZ TNFRSF4 ATAD3C PUSL1 SSU72 LOC105378949 MIR6726 LOC100130417 LOC105378592 CCNL2 TAS1R3 FAM41C GABRD LOC100134822 OR4F29 MTND1P23 ANKRD65 OR4F5 WASH7P CALML6 LOC100133331 MRPL20 TMEM240 LOC105378948 LOC107985729 ATAD3A LOC100506504 KLHL17 MIR1302-2 LOC100288069 MIB2 LOC102725121
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss CFAP74 GABRD PRKCZ LOC105378591 LOC105378589
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss ATAD3C CFAP74 SSU72 LOC105378949 TMEM88B VWA1 LOC148413 LOC105378589 SLC35E2B ATAD3B CCNL2 SLC35E2 CDK11B GABRD LOC102724312 CDK11A NADK TMEM52 ANKRD65 FNDC10 CALML6 MRPL20 TMEM240 LOC107985729 ATAD3A GNB1 MMP23A PRKCZ MIB2 MMP23B LOC105378591

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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