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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:800432 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00278228_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 NP_665893.2
NM_145887.3 NP_665894.2
XM_005253005.4 XP_005253062.1
XM_005253006.4 XP_005253063.1
XM_005253007.3 XP_005253064.1
XM_005253008.4 XP_005253065.1
XM_011520209.2 XP_011518511.1
XM_011520210.2 XP_011518512.1
XM_011520211.2 XP_011518513.1
XM_011520212.1 XP_011518514.1
XM_011520213.2 XP_011518515.1
XM_017017993.1 XP_016873482.1
AB208832.1 BAD92069.1
AB208949.1 BAD92186.1
AB209529.1 BAD92766.1
AF229178.1 AAF69491.1
AF274972.1 AAG13461.1
AF465246.1 AAP97716.1
AK074893.1 BAC11272.1
AL833849.1 CAD38708.1
BC014904.1 AAH14904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PDDC1 CEND1 POLR2L PANO1 CD151 PNPLA2 PIDD1 CRACR2B RPLP2 CHID1 SLC25A22 LOC171391 TSPAN4 SNORA52
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC6 AP2A2 POLR2L IRF7 TOLLIP CD151 MIR210HG RASSF7 CRACR2B TALDO1 RPLP2 PTDSS2 RNH1 LMNTD2 EPS8L2 B4GALNT4 DEAF1 SCT LOC171391 MIR210 PDDC1 SIGIRR CEND1 DRD4 TMEM80 PKP3 PANO1 LOC101927503 PNPLA2 PIDD1 MUC5AC ANO9 PHRF1 MUC2 MIR6744 HRAS CHID1 CDHR5 LOC101059906 LRRC56 SLC25A22 TSPAN4 MUC5B LOC143666 SNORA52
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PDDC1 CEND1 AP2A2 POLR2L PANO1 CD151 PNPLA2 PIDD1 CRACR2B RPLP2 CHID1 SLC25A22 LOC171391 TSPAN4 SNORA52
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC6 AP2A2 POLR2L IRF7 TOLLIP CD151 MIR210HG RASSF7 CRACR2B TALDO1 RPLP2 PTDSS2 RNH1 LMNTD2 EPS8L2 DEAF1 SCT LOC171391 MIR210 PDDC1 TOLLIP-AS1 SIGIRR CEND1 DRD4 TMEM80 PANO1 LOC101927503 PNPLA2 PIDD1 MUC5AC ANO9 PHRF1 MUC2 MIR6744 HRAS CHID1 CDHR5 LOC101059906 LRRC56 SLC25A22 TSPAN4 MUC5B LOC143666 SNORA52
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion AP2A2 POLR2L IRF7 CD151 MIR210HG RASSF7 CRACR2B TALDO1 RPLP2 PTDSS2 RNH1 LMNTD2 EPS8L2 B4GALNT4 DEAF1 SCT LOC171391 MIR210 PDDC1 SIGIRR CEND1 DRD4 TMEM80 PKP3 PANO1 PNPLA2 PIDD1 ANO9 PHRF1 HRAS CHID1 CDHR5 LOC101059906 LRRC56 SLC25A22 TSPAN4 LOC143666 SNORA52
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PDDC1 CEND1 POLR2L PANO1 CD151 PNPLA2 PIDD1 CRACR2B RPLP2 CHID1 SLC25A22 LOC171391 TSPAN4 SNORA52
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss PDDC1 CEND1 PANO1 SLC25A22 LOC171391 PIDD1 TALDO1 RPLP2
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PDDC1 CEND1 PANO1 SLC25A22 CD151 PNPLA2 LOC171391 PIDD1 CRACR2B RPLP2 SNORA52
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion POLR2L IRF7 CD151 MIR210HG RASSF7 CRACR2B TALDO1 RPLP2 PTDSS2 RNH1 LMNTD2 EPS8L2 DEAF1 SCT LOC171391 MIR210 PDDC1 CEND1 DRD4 TMEM80 PANO1 PNPLA2 PIDD1 PHRF1 HRAS CHID1 CDHR5 LOC101059906 LRRC56 SLC25A22 TSPAN4 LOC143666 SNORA52
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PDDC1 CEND1 POLR2L PANO1 CD151 PNPLA2 PIDD1 CRACR2B TALDO1 RPLP2 CHID1 SLC25A22 LOC171391 TSPAN4 SNORA52

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More Information


Additional Information:

For this assay, SNP(s) [rs147405558] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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