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See other PRKCZ CNV Assays ›
Gene Symbol
PRKCZ
Assay Reference Genome
Location

Chr.1:2073783 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00336426_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5590

Gene Name:

 protein kinase C zeta

Gene Aliases:

 PKC-ZETA, PKC2

Location:

 Chr.1:2050470-2185395 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKCZ NM_001033581.1 1 137 NP_001028753.1
NM_002744.4 NP_002735.3
XM_011541773.1 XP_011540075.1
XM_011541775.2 XP_011540077.1
XM_011541776.1 1 150 XP_011540078.1
XM_017001789.1 XP_016857278.1
XM_017001790.1 XP_016857279.1
XM_017001792.1 1 150 XP_016857281.1
XM_017001796.1 1 150 XP_016857285.1
XM_017001802.1 1 150 XP_016857291.1
XM_017001803.1 XP_016857292.1
XM_017001804.1 1 60 XP_016857293.1
AK290995.1
AK294649.1 1 139
BC008058.2 AAH08058.1
BC014270.2 AAH14270.1
BT007082.1 AAP35745.1
CB152283.1 1 137
L14283.1 AAA36488.1
Z15108.1 CAA78813.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951425 Chr.1:2018162 - 2112261 on Build GRCh38 Deletion GABRD LOC105378591 PRKCZ
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6808 LOC100287934 WASH7P OR4F5 PERM1 CDK11B LOC105378949 CFAP74 ANKRD65 MIR200A LOC105378592 MRPL20 SDF4 MIR1302-2 TNFRSF18 LOC100132287 MORN1 LOC148413 CALML6 LINC00115 SLC35E2 HES4 LOC105378589 B3GALT6 CPSF3L PUSL1 LOC729737 MIR6859-1 MMP23A MIR6726 LOC107984841 LOC105378947 LOC102724312 CDK11A FAM87B OR4F29 ATAD3C SLC35E2B TTLL10 SSU72 UBE2J2 FAM41C LOC105378948 VWA1 TNFRSF4 LOC107985728 SAMD11 ACAP3 GNB1 OR4F16 SKI LOC100288069 MXRA8 LOC102725121 GABRD TMEM88B FAAP20 LOC100506504 LOC100133331 CPTP LOC100134822 LOC101928626 AGRN RNF223 SCNN1D LINC01342 AURKAIP1 ATAD3A MIR429 LOC100129534 FAM132A MMP23B MIR6727 LOC100130417 LOC284600 TTLL10-AS1 NADK FAM138A NOC2L DDX11L1 CCNL2 TMEM52 FNDC10 MIB2 TAS1R3 MIR200B LOC100288175 KLHL17 MIR6723 LINC01128 LOC107985729 TMEM240 MIR6859-2 DVL1 ISG15 ATAD3B LOC105378591 MTND1P23 C1orf159 PRKCZ MTND2P28 PLEKHN1
nsv834446 Chr.1:1960604 - 2156435 on Build GRCh38 Loss GABRD LOC105378589 CFAP74 LOC105378591 PRKCZ
nsv2520 Chr.1:2063294 - 2089621 on Build GRCh38 Insertion PRKCZ
nsv509479 Chr.1:2072311 - 2176998 on Build GRCh38 Insertion PRKCZ
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss GABRD TMEM88B CDK11B MMP23A NADK LOC105378949 LOC102724312 CDK11A CFAP74 CCNL2 ATAD3C TMEM52 ANKRD65 SLC35E2B FNDC10 MIB2 MRPL20 SSU72 LOC148413 CALML6 LOC107985729 TMEM240 ATAD3A SLC35E2 VWA1 GNB1 ATAD3B LOC105378589 LOC105378591 PRKCZ MMP23B

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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