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See other FANCA CNV Assays ›
Gene Symbol
FANCA
Assay Reference Genome
Location

Chr.16:89739902 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00371136_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2175

Gene Name:

 Fanconi anemia complementation group A

Gene Aliases:

 FA, FA-H, FA1, FAA, FACA, FAH, FANCH

Location:

 Chr.16:89737551-89816658 on Build GRCh38

Assay Gene Location:

 Within Intron 41
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FANCA NM_000135.2 NP_000126.2
NM_001286167.1 NP_001273096.1
XM_005256294.4 XP_005256351.1
XM_011522945.2 XP_011521247.1
XM_011522946.2 XP_011521248.1
XM_011522947.2 XP_011521249.1
XM_017023044.1 XP_016878533.1
AK299282.1
AK301168.1 11 1269
X99226.1 CAA67610.1

Target Gene Details

Entrez Gene ID:

 92822

Gene Name:

 zinc finger protein 276

Gene Aliases:

 CENP-Z, CENPZ, ZADT, ZFP276, ZNF477

Location:

 Chr.16:89720368-89740925 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ZNF276 NM_001113525.1 11 3598 NP_001106997.1
NM_152287.3 11 3588 NP_689500.2
NR_110122.1
NR_110126.1
NR_110128.1
NR_110129.1
XM_017023890.1 XP_016879379.1
AK056405.1
AK096004.1 1 1360
BM972950.1
BQ432535.1 1 542

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1931 Chr.16:89713649 - 89746701 on Build GRCh38 Insertion VPS9D1 FANCA ZNF276 VPS9D1-AS1
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss LOC105371419 TCF25 FANCA ZNF276 LOC107984817 SPIRE2
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion VPS9D1 FANCA ZNF276 SPATA2L VPS9D1-AS1 CDK10
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain LOC105371419 VPS9D1 FANCA ZNF276 LOC107984817 SPATA33 SPIRE2 SPATA2L VPS9D1-AS1 CDK10
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss TCF25 CENPBD1 DPEP1 AFG3L1P SPATA33 SPIRE2 GAS8-AS1 DBNDD1 TUBB3 VPS9D1-AS1 CDK10 LOC105371419 VPS9D1 CHMP1A MC1R FANCA ZNF276 LOC107984817 GAS8 DEF8 SPATA2L
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss RPL13 CENPBD1 TUBB8P7 AFG3L1P SPATA33 GAS8-AS1 DBNDD1 VPS9D1-AS1 ANKRD11 CPNE7 MC1R PRDM7 URAHP ZNF276 LOC107984817 DEF8 SPG7 LOC101927817 FAM157C TCF25 DPEP1 SNORD68 ZNF778 SPIRE2 TUBB3 CDK10 LOC105371419 VPS9D1 CHMP1A FANCA LOC100287036 LOC105371414 GAS8 SPATA2L
nsv833331 Chr.16:89726091 - 89849806 on Build GRCh38 Gain+Loss LOC105371419 FANCA ZNF276 LOC107984817 SPIRE2
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss VPS9D1 FANCA ZNF276 SPATA2L VPS9D1-AS1 CDK10
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CTU2 RPL13 SPATA33 MC1R MIR4722 CDT1 LOC339059 LINC00304 PRDM7 URAHP MVD CDH15 LOC107984817 PABPN1L LOC101927817 TCF25 SNORD68 LOC101927793 ZNF778 CDK10 VPS9D1 FANCA LOC105371409 PIEZO1 GAS8 SLC22A31 ACSF3 SPATA2L CENPBD1 RNF166 TUBB8P7 AFG3L1P GAS8-AS1 DBNDD1 VPS9D1-AS1 ANKRD11 CPNE7 ZNF276 CBFA2T3 TRAPPC2L DEF8 SPG7 LOC100129697 APRT FAM157C DPEP1 SPIRE2 LOC100289580 TUBB3 LOC105371419 SNAI3-AS1 CHMP1A CYBA LOC107987238 LOC100287036 LOC400558 SNAI3 IL17C LOC105371414 GALNS
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion RPL13 DPEP1 SNORD68 SPATA33 VPS9D1-AS1 CDK10 VPS9D1 CPNE7 CHMP1A FANCA ZNF276 SPG7 SPATA2L

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