Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 56344 |
Gene Name: | calcium binding protein 5 |
Gene Aliases: |
CABP3 |
Location: |
Chr.19:48029383-48048342 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CABP5 | XM_017026992.1 | XP_016882481.1 |
Target Gene Details
Entrez Gene ID: | 8605 |
Gene Name: | phospholipase A2 group IVC |
Gene Aliases: |
CPLA2-gamma |
Location: |
Chr.19:48047843-48111445 on Build GRCh38 |
Assay Gene Location: | Within Exon 21 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PLA2G4C | NM_001159322.1 | 17 | 2090 | NP_001152794.1 |
| NM_001159323.1 | 17 | 2164 | NP_001152795.1 | |
| NM_003706.2 | 17 | 2121 | NP_003697.2 | |
| XM_011527431.2 | 16 | 2660 | XP_011525733.1 | |
| XM_017027411.1 | 16 | 2703 | XP_016882900.1 | |
| XM_017027412.1 | 18 | 3143 | XP_016882901.1 | |
| XM_017027413.1 | 18 | 3186 | XP_016882902.1 | |
| AF058921.1 | 17 | 2032 | AAC32823.1 | |
| AF065214.1 | 17 | 2066 | AAC78835.1 | |
| AK022440.1 | 17 | 2094 | ||
| AK295400.1 | 17 | 2055 | ||
| AL050193.1 | 3 | 398 | CAB43312.3 | |
| BC063416.1 | 17 | 2104 | AAH63416.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 PLA2G4C
ELSPBP1
CABP5
C19orf68
PLA2G4C-AS1
LIG1
BSPH1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
MIR150
IL4I1
PLA2G4C
SNAR-B2
C19orf68
FLT3LG
PLA2G4C-AS1
SNAR-A10
MIR6800
CCDC114
TSKS
KDELR1
SULT2B1
LOC105372430
SNAR-D
RPS11
SNORD33
PLEKHA4
LHB
RUVBL2
MIR6799
MIR4751
FTL
LOC101059948
GFY
SNORD35B
RRAS
FUT2
AP2A1
BSPH1
DKKL1
NOSIP
LOC101928295
SNAR-A5
ZNF473
SPACA4
SNAR-A12
GYS1
DHDH
IZUMO1
PTH2
FCGRT
SNAR-A4
CGB3
SNAR-G1
HSD17B14
ATF5
SNAR-B1
FUZ
SNAR-A8
GRIN2D
SPHK2
SNAR-A2
RCN3
SNAR-C2
CGB8
ZNF114
BCAT2
PRMT1
NUCB1
FUT1
NTN5
GRWD1
MIR5088
BAX
SNAR-A7
ALDH16A1
SNAR-A1
BCL2L12
SNAR-C1
FAM83E
AKT1S1
PNKP
ELSPBP1
SIGLEC11
KCNJ14
SNAR-G2
LIG1
SNAR-A13
SNORD35A
SLC17A7
NUP62
PPP1R15A
CABP5
MIR4750
SNAR-A9
CGB1
SNAR-C3
LOC100287477
RPL13A
CARD8-AS1
SEC1P
SNORD32A
NUCB1-AS1
RASIP1
TEAD2
LOC105447645
NTF4
VRK3
SNAR-A14
ADM5
CPT1C
PTOV1
SNAR-C4
MAMSTR
PPFIA3
TMEM143
FGF21
CCDC155
DBP
PTOV1-AS1
HRC
MED25
CGB5
MIR4324
RPL18
CGB7
SYNGR4
PIH1D1
EMP3
MIR6798
CYTH2
KCNA7
CGB2
LIN7B
SNAR-C5
SNORD34
PRRG2
SCAF1
SNRNP70
FLJ26850
C19orf73
SNAR-A6
CD37
SNAR-A11
MIR4749
IRF3
CA11
TULP2
PTOV1-AS2
TRPM4
SIGLEC16
SNAR-A3
LMTK3
PRR12
TBC1D17
SLC6A16
CARD8
|
| dgv3610n100 | Chr.19:48024325 - 48062810 on Build GRCh38 | Gain |
PLA2G4C
ELSPBP1
CABP5
PLA2G4C-AS1
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
PLA2G4C
CABP5
C19orf68
PLA2G4C-AS1
CARD8-AS1
CCDC114
GRIN2D
KDELR1
ELSPBP1
ZNF114
SYNGR4
LIG1
EMP3
TMEM143
CARD8
|
| nsv2516 | Chr.19:48046715 - 48080669 on Build GRCh38 | Insertion |
PLA2G4C
CABP5
PLA2G4C-AS1
|
| nsv1062163 | Chr.19:48040339 - 48075632 on Build GRCh38 | Gain |
PLA2G4C
CABP5
PLA2G4C-AS1
|
| nsv1058785 | Chr.19:48004749 - 48075632 on Build GRCh38 | Gain |
PLA2G4C
ELSPBP1
CABP5
PLA2G4C-AS1
|
| esv3893228 | Chr.19:48002211 - 48072851 on Build GRCh38 | Loss |
PLA2G4C
ELSPBP1
CABP5
PLA2G4C-AS1
|
| nsv1058622 | Chr.19:47798576 - 48077885 on Build GRCh38 | Gain |
PLA2G4C
CABP5
PLA2G4C-AS1
LINC01595
SNAR-A1
SNAR-C5
SNAR-C3
SNAR-C1
SULT2A1
BSPH1
SNAR-A3
SNAR-A2
SNAR-C2
ELSPBP1
SNAR-A12
SNAR-C4
CRX
TPRX1
SNAR-A13
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top