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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49663434 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00422921_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 3 499 NP_001184051.1
NM_001197123.1 3 557 NP_001184052.1
NM_001197124.1 3 499 NP_001184053.1
NM_001197125.1 2 326 NP_001184054.1
NM_001197126.1 NP_001184055.1
NM_001197127.1 2 326 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 3 499 NP_001562.1
NR_045568.1 3 646
XM_006723197.1 3 477 XP_006723260.1
XM_006723198.1 3 413 XP_006723261.1
XM_006723200.1 2 162 XP_006723263.1
XM_006723201.1 2 235 XP_006723264.1
XM_006723202.2 3 384 XP_006723265.1
XM_017026766.1 3 468 XP_016882255.1
XM_017026767.1 3 413 XP_016882256.1
AB102884.1 BAD89413.1
AB102887.1 2 246 BAD89416.1
AK057577.1 2 1265
AK292027.1 3 628
AK314421.1 3 412
BC000660.2 3 401 AAH00660.1
BC009395.2 3 426 AAH09395.1
BC071721.1 2 588 AAH71721.1
BP347627.1 2 167
CB961512.1 3 507
HM357932.1 3 387
HM357933.1
HM357934.1
HM357935.1 2 156
HM357936.1 3 329
HM357937.1 2 156
Z56281.1 3 292 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss NOSIP CPT1C BCL2L12 PRRG2 SCAF1 MIR5088 PRMT1 ADM5 PRR12 RRAS IRF3
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss NOSIP CPT1C BCL2L12 PRRG2 SCAF1 MIR5088 PRMT1 ADM5 PRR12 RRAS IRF3
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SIGLEC11 PTH2 CGB7 SNORD35B BAX PLA2G4C MIR6799 CGB2 LIG1 PLA2G4C-AS1 MIR4750 DKKL1 CA11 FAM83E SULT2B1 EMP3 LOC105447645 ZNF114 SNAR-A8 SLC6A16 LOC105372430 LOC101059948 LMTK3 RPL13A RASIP1 SNAR-G1 MIR150 PNKP PLEKHA4 TSKS SNAR-C1 DHDH CGB3 ALDH16A1 GRWD1 FUT2 SNORD33 BCAT2 RPL18 NOSIP CGB5 SPHK2 RUVBL2 ADM5 SNAR-A10 ELSPBP1 GFY NTN5 KCNA7 PRR12 SNORD34 SNAR-B1 FLJ26850 LOC100287477 FLT3LG DBP AKT1S1 HSD17B14 SNRNP70 CARD8 CPT1C MIR6798 MIR4751 SNORD32A SNAR-A3 SNAR-A11 IL4I1 SEC1P KDELR1 CD37 SNAR-C4 SNAR-A13 BCL2L12 SCAF1 TRPM4 ATF5 GYS1 NUCB1-AS1 TBC1D17 PIH1D1 SNAR-D SIGLEC16 CYTH2 CGB1 SNAR-B2 LIN7B CARD8-AS1 SLC17A7 PPP1R15A HRC LOC101928295 SNAR-C5 NUP62 LHB MIR4749 SNORD35A FUT1 SNAR-A7 PPFIA3 CCDC155 NTF4 C19orf73 IZUMO1 RPS11 PTOV1-AS1 MED25 RCN3 IRF3 MIR6800 SYNGR4 PRRG2 SNAR-G2 SNAR-C3 SNAR-A9 CGB8 PRMT1 BSPH1 SNAR-A2 FTL PTOV1 SNAR-A12 CABP5 TEAD2 MIR4324 SNAR-A14 PTOV1-AS2 MAMSTR SNAR-A6 SPACA4 SNAR-A5 ZNF473 CCDC114 FUZ VRK3 RRAS FGF21 GRIN2D TMEM143 NUCB1 KCNJ14 MIR5088 AP2A1 SNAR-A4 SNAR-C2 SNAR-A1 C19orf68 TULP2 FCGRT
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain CPT1C BCL2L12 SCAF1 MIR5088 PRMT1 ADM5 PRR12 RRAS IRF3
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 IL4I1 BCL2L12 PRRG2 SCAF1 PRMT1 ATF5 MIR6799 TBC1D17 NOSIP MIR4750 PTOV1 ADM5 PTOV1-AS2 NUP62 MIR4749 FUZ PRR12 RRAS AKT1S1 CPT1C MIR5088 PNKP AP2A1 MIR4751 TSKS PTOV1-AS1 MED25 IRF3
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain NOSIP CPT1C BCL2L12 PRRG2 SCAF1 MIR5088 PRMT1 ADM5 PRR12 RRAS IRF3
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6800 BCL2L12 PRRG2 SCAF1 PRMT1 SNORD35B SNORD33 MIR6799 NOSIP ADM5 SNORD35A FUZ PRR12 SNORD34 RRAS RPL13A CPT1C RPS11 MIR5088 MIR150 AP2A1 TSKS SNORD32A PTOV1-AS1 MED25 RCN3 IRF3 FCGRT
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss NOSIP BCL2L12 PRRG2 SCAF1 PRMT1 PRR12 RRAS IRF3

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