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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658636 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00434404_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 2137 NP_067007.3
AJ245433.1 1 2098 CAB51603.1
BC012950.1 1 2137 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv462871 Chr.6:31607499 - 31664357 on Build GRCh38 Loss GPANK1 SNORA38 C6orf47 BAG6 AIF1 MIR6832 PRRC2A APOM
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion SNORA38 LOC100287329 GPSM3 NEU1 HSPA1L MSH5 NELFE NOTCH4 HSPA1B HLA-DRB6 DDAH2 TNF LOC100507547 BAG6 ABHD16A SAPCD1-AS1 RNF5 PPT2 TNXA DDX39B C2-AS1 ZBTB12 AIF1 ATF6B HCG26 MIR6833 MIR1236 C6orf10 LOC102725068 BTNL2 SNORD48 HCP5 ATP6V1G2 GPANK1 LY6G6F STK19 LTA C2 MCCD1 CLIC1 MIR6832 C6orf48 LTB HSPA1A HCG23 CYP21A1P MIR4646 LY6G5C SAPCD1 LY6G5B CSNK2B C4A LST1 NCR3 ATP6V1G2-DDX39B MIR6721 AGPAT1 LSM2 MSH5-SAPCD1 VARS LOC101929163 SLC44A4 FKBPL PRRT1 HLA-DRB1 LY6G6C C6orf25 SNORD52 SNORD84 MICB EGFL8 SKIV2L LY6G6D HLA-DRA AGER CFB C6orf47 EHMT2 DDX39B-AS1 PRRC2A HLA-DRB5 C4B PPT2-EGFL8 APOM SNORD117 CYP21A2 NFKBIL1 DXO PBX2 VWA7 LY6G6E TNXB
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion RGL2 LOC100287329 SLC39A7 NEU1 HLA-DOA NOTCH4 WDR46 HSPA1B COL11A2 KIFC1 HSD17B8 LOC100507547 BAG6 ABHD16A RING1 RNF5 TNXA LOC100294145 PFDN6 DDX39B PSMB8-AS1 ATF6B MIR6833 SNORD48 ATP6V1G2 GPANK1 STK19 LTA MIR6873 ZBTB9 MCCD1 RPS18 CLIC1 HLA-DMB C6orf48 CYP21A1P MIR4646 LY6G5B CSNK2B C4A LST1 NCR3 ATP6V1G2-DDX39B MIR6721 PHF1 MSH5-SAPCD1 FKBPL LY6G6C C6orf25 SNORD52 BRD2 HLA-DMA RXRB MICB ZBTB22 LY6G6D AGER CFB C6orf47 DDX39B-AS1 HLA-DQB1-AS1 HCG24 PRRC2A HLA-DRB5 PPT2-EGFL8 SYNGAP1 PSMB9 DXO VPS52 VWA7 LY6G6E TAP1 DAXX SNORA38 GPSM3 HSPA1L MSH5 NELFE HLA-DRB6 CUTA DDAH2 HLA-DQB2 TNF PSMB8 SAPCD1-AS1 PPT2 HCG25 C2-AS1 ZBTB12 AIF1 HCG26 MIR1236 C6orf10 LOC102725068 HLA-DQA2 BTNL2 HCP5 HLA-DQA1 LY6G6F C2 HLA-DOB MIR3135B HLA-DQB1 MIR6832 LTB HSPA1A HCG23 LY6G5C SAPCD1 HLA-DPB1 AGPAT1 LSM2 VARS LOC101929163 SLC44A4 PRRT1 HLA-DRB1 SNORD84 MIR5004 EGFL8 TAPBP SKIV2L HLA-DRA TAP2 EHMT2 C4B MIR6834 APOM SNORD117 CYP21A2 NFKBIL1 HLA-DPA1 PPP1R2P1 PBX2 TNXB B3GALT4 MIR219A1 HLA-DPB2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss SNORA38 LOC100287329 NEU1 HSPA1L MSH5 NELFE HSPA1B MIR6891 DDAH2 TNF BAG6 ABHD16A SAPCD1-AS1 TNXA DDX39B C2-AS1 ZBTB12 AIF1 HCG26 MIR1236 LOC102725068 MICA SNORD48 HCP5 ATP6V1G2 GPANK1 LY6G6F STK19 LTA C2 MCCD1 CLIC1 MIR6832 C6orf48 LTB HSPA1A CYP21A1P MIR4646 LY6G5C SAPCD1 LY6G5B CSNK2B C4A LST1 NCR3 ATP6V1G2-DDX39B LSM2 MSH5-SAPCD1 VARS SLC44A4 LY6G6C C6orf25 SNORD52 SNORD84 MICB SKIV2L LY6G6D CFB C6orf47 EHMT2 DDX39B-AS1 HLA-B PRRC2A C4B APOM SNORD117 CYP21A2 NFKBIL1 DXO VWA7 LY6G6E TNXB
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion RGL2 LOC100287329 SLC39A7 NEU1 HLA-DOA NOTCH4 WDR46 HSPA1B COL11A2 KIFC1 HSD17B8 LOC100507547 BAG6 ABHD16A RING1 RNF5 TNXA LOC100294145 PFDN6 DDX39B PSMB8-AS1 ATF6B MIR6833 SNORD48 ATP6V1G2 GPANK1 STK19 LTA MIR6873 ZBTB9 MCCD1 RPS18 CLIC1 HLA-DMB C6orf48 CYP21A1P MIR4646 LY6G5B CSNK2B C4A LST1 NCR3 ATP6V1G2-DDX39B MIR6721 PHF1 MSH5-SAPCD1 FKBPL LY6G6C C6orf25 SNORD52 BRD2 HLA-DMA RXRB MICB ZBTB22 LY6G6D AGER CFB C6orf47 DDX39B-AS1 HLA-DQB1-AS1 HCG24 PRRC2A HLA-DRB5 PPT2-EGFL8 SYNGAP1 PSMB9 DXO VPS52 VWA7 LY6G6E TAP1 DAXX SNORA38 GPSM3 HSPA1L MSH5 NELFE HLA-DRB6 CUTA DDAH2 HLA-DQB2 TNF PSMB8 SAPCD1-AS1 PPT2 HCG25 C2-AS1 ZBTB12 AIF1 HCG26 MIR1236 C6orf10 LOC102725068 HLA-DQA2 BTNL2 HCP5 HLA-DQA1 LY6G6F C2 HLA-DOB MIR3135B HLA-DQB1 MIR6832 LTB HSPA1A HCG23 LY6G5C SAPCD1 HLA-DPB1 AGPAT1 LSM2 VARS LOC101929163 SLC44A4 PRRT1 HLA-DRB1 SNORD84 MIR5004 EGFL8 TAPBP SKIV2L HLA-DRA TAP2 EHMT2 C4B MIR6834 APOM SNORD117 CYP21A2 NFKBIL1 HLA-DPA1 PPP1R2P1 PBX2 TNXB B3GALT4 MIR219A1 HLA-DPB2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss SNORA38 LOC100287329 GPSM3 NEU1 HSPA1L MSH5 NELFE NOTCH4 HSPA1B MIR6891 DDAH2 TNF LOC100507547 BAG6 ABHD16A SAPCD1-AS1 RNF5 PPT2 TNXA DDX39B C2-AS1 ZBTB12 AIF1 ATF6B HCG26 MIR6833 MIR1236 C6orf10 LOC102725068 MICA BTNL2 SNORD48 HCP5 ATP6V1G2 GPANK1 LY6G6F STK19 LTA C2 MCCD1 CLIC1 MIR6832 C6orf48 LTB HSPA1A HCG23 CYP21A1P MIR4646 LY6G5C SAPCD1 LY6G5B CSNK2B C4A LST1 NCR3 ATP6V1G2-DDX39B MIR6721 AGPAT1 LSM2 MSH5-SAPCD1 VARS LOC101929163 SLC44A4 FKBPL PRRT1 LY6G6C C6orf25 SNORD52 SNORD84 MICB EGFL8 SKIV2L LY6G6D HLA-DRA AGER CFB C6orf47 EHMT2 DDX39B-AS1 HLA-B PRRC2A C4B PPT2-EGFL8 APOM SNORD117 CYP21A2 NFKBIL1 DXO PBX2 VWA7 LY6G6E TNXB
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion CSNK2B SNORA38 C6orf47 AIF1 PRRC2A APOM GPANK1 LY6G6F BAG6 ABHD16A LY6G6E MIR6832 MIR4646 LY6G5C LY6G5B
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss CSNK2B LST1 NCR3 ATP6V1G2-DDX39B SNORA38 LOC100287329 TNF BAG6 ABHD16A SNORD84 DDX39B C6orf47 AIF1 DDX39B-AS1 PRRC2A APOM ATP6V1G2 GPANK1 SNORD117 LTA MCCD1 NFKBIL1 MIR6832 LTB LY6G5C LY6G5B

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