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Gene Symbol
DXO
Assay Reference Genome
Location

Chr.6:31970463 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00437532_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1797

Gene Name:

 decapping exoribonuclease

Gene Aliases:

 DOM3L, DOM3Z, NG6, RAI1

Location:

 Chr.6:31969811-31972290 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DXO NM_005510.3 NP_005501.2
XM_006715005.3 XP_006715068.1
XM_017010329.1 XP_016865818.1
AF059252.1 AAC78603.1
AK310107.1
BC009344.2 AAH09344.1
BC019083.2 AAH19083.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss LOC101929163 DXO C6orf10 PPT2-EGFL8 TNXB PRRT1 HSPA1B C4A SLC44A4 AGER SKIV2L NOTCH4 NEU1 FKBPL HLA-DRA C2 MIR6833 C2-AS1 HCG23 ATF6B RNF5 HLA-DQB1-AS1 HLA-DQA1 STK19 ZBTB12 CYP21A1P BTNL2 CFB AGPAT1 C6orf48 HLA-DRB5 NELFE HLA-DRB6 HLA-DRB1 LOC100507547 EGFL8 HLA-DQB1 HSPA1A SNORD52 PBX2 SNORD48 TNXA C4B EHMT2 MIR1236 CYP21A2 MIR6721 GPSM3 PPT2
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss AGPAT1 DXO PPT2-EGFL8 TNXB PRRT1 C4A NELFE AGER SKIV2L NOTCH4 FKBPL LOC100507547 C2 MIR6833 C2-AS1 EGFL8 ATF6B RNF5 PBX2 TNXA STK19 CYP21A1P C4B CFB MIR1236 CYP21A2 MIR6721 GPSM3 PPT2
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LOC101929163 MSH5 DXO C6orf10 PPT2-EGFL8 TNXB PRRT1 HSPA1B C4A LOC100287329 SLC44A4 AGER ATP6V1G2-DDX39B LY6G5B SKIV2L NOTCH4 NEU1 FKBPL HLA-DRA MCCD1 C2 PRRC2A MIR6833 C6orf47 C2-AS1 DDAH2 LY6G6F HCG23 ATF6B HSPA1L LTA RNF5 ABHD16A LY6G6E APOM NFKBIL1 LTB STK19 ZBTB12 CYP21A1P AIF1 BTNL2 ATP6V1G2 MSH5-SAPCD1 CFB C6orf25 LST1 AGPAT1 C6orf48 CLIC1 CSNK2B SNORD84 SNORD117 HLA-DRB5 MIR6832 NELFE HLA-DRB6 MICB HLA-DRB1 LSM2 LOC100507547 VWA7 LY6G6D LY6G5C DDX39B EGFL8 SAPCD1-AS1 LOC102725068 HCG26 BAG6 DDX39B-AS1 NCR3 HSPA1A SNORD52 GPANK1 PBX2 SNORD48 TNXA MIR4646 VARS TNF SAPCD1 C4B SNORA38 EHMT2 MIR1236 LY6G6C CYP21A2 MIR6721 GPSM3 HCP5 PPT2
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion MSH5 TNXB HSPA1B LOC100287329 HLA-DMA ZBTB22 KIFC1 FKBPL HLA-DRA HLA-DPB2 C2 PRRC2A C6orf47 C2-AS1 TAP1 LY6G6F HCG23 LTA RNF5 ABHD16A HCG25 APOM NFKBIL1 LTB MIR6834 HLA-DQA2 STK19 ZBTB12 BTNL2 C6orf25 MIR5004 CLIC1 SNORD84 SNORD117 MIR6832 NELFE HLA-DRB1 LSM2 LOC100294145 LOC100507547 VWA7 LY6G5C DDX39B HLA-DQB1 SAPCD1-AS1 COL11A2 LOC102725068 HCG26 SLC39A7 DDX39B-AS1 NCR3 HSPA1A SNORD48 TNF DAXX BRD2 HLA-DOA SNORA38 EHMT2 MIR1236 CYP21A2 MIR6721 GPSM3 HCP5 LOC101929163 TAPBP DXO C6orf10 PPT2-EGFL8 PRRT1 RPS18 HLA-DPB1 C4A SLC44A4 AGER ATP6V1G2-DDX39B LY6G5B HCG24 MIR219A1 SKIV2L NOTCH4 NEU1 MCCD1 MIR6833 DDAH2 PSMB9 ATF6B HSPA1L WDR46 HLA-DQB1-AS1 LY6G6E HSD17B8 HLA-DQA1 CYP21A1P AIF1 ATP6V1G2 MSH5-SAPCD1 CFB HLA-DOB LST1 AGPAT1 C6orf48 PSMB8-AS1 CSNK2B B3GALT4 PHF1 HLA-DRB5 RING1 HLA-DRB6 MICB MIR6873 HLA-DPA1 PFDN6 TAP2 LY6G6D RGL2 EGFL8 VPS52 PSMB8 CUTA HLA-DMB MIR3135B BAG6 SNORD52 GPANK1 PBX2 TNXA MIR4646 VARS HLA-DQB2 RXRB SAPCD1 C4B PPP1R2P1 LY6G6C ZBTB9 SYNGAP1 PPT2
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss MSH5 DXO TNXB HSPA1B C4A LOC100287329 SLC44A4 ATP6V1G2-DDX39B LY6G5B SKIV2L NEU1 HLA-B MCCD1 C2 PRRC2A C6orf47 C2-AS1 DDAH2 LY6G6F HSPA1L LTA ABHD16A LY6G6E APOM NFKBIL1 LTB STK19 ZBTB12 MIR6891 CYP21A1P AIF1 ATP6V1G2 MSH5-SAPCD1 CFB C6orf25 LST1 C6orf48 CLIC1 CSNK2B SNORD84 SNORD117 MIR6832 NELFE MICB LSM2 VWA7 LY6G6D LY6G5C DDX39B SAPCD1-AS1 LOC102725068 HCG26 BAG6 DDX39B-AS1 NCR3 MICA HSPA1A SNORD52 GPANK1 SNORD48 TNXA MIR4646 VARS TNF SAPCD1 C4B SNORA38 EHMT2 MIR1236 LY6G6C CYP21A2 HCP5
nsv830628 Chr.6:31919777 - 31979823 on Build GRCh38 Loss DXO STK19 SKIV2L C2 CFB MIR1236 NELFE C2-AS1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion MSH5 TNXB HSPA1B LOC100287329 HLA-DMA ZBTB22 KIFC1 FKBPL HLA-DRA HLA-DPB2 C2 PRRC2A C6orf47 C2-AS1 TAP1 LY6G6F HCG23 LTA RNF5 ABHD16A HCG25 APOM NFKBIL1 LTB MIR6834 HLA-DQA2 STK19 ZBTB12 BTNL2 C6orf25 MIR5004 CLIC1 SNORD84 SNORD117 MIR6832 NELFE HLA-DRB1 LSM2 LOC100294145 LOC100507547 VWA7 LY6G5C DDX39B HLA-DQB1 SAPCD1-AS1 COL11A2 LOC102725068 HCG26 SLC39A7 DDX39B-AS1 NCR3 HSPA1A SNORD48 TNF DAXX BRD2 HLA-DOA SNORA38 EHMT2 MIR1236 CYP21A2 MIR6721 GPSM3 HCP5 LOC101929163 TAPBP DXO C6orf10 PPT2-EGFL8 PRRT1 RPS18 HLA-DPB1 C4A SLC44A4 AGER ATP6V1G2-DDX39B LY6G5B HCG24 MIR219A1 SKIV2L NOTCH4 NEU1 MCCD1 MIR6833 DDAH2 PSMB9 ATF6B HSPA1L WDR46 HLA-DQB1-AS1 LY6G6E HSD17B8 HLA-DQA1 CYP21A1P AIF1 ATP6V1G2 MSH5-SAPCD1 CFB HLA-DOB LST1 AGPAT1 C6orf48 PSMB8-AS1 CSNK2B B3GALT4 PHF1 HLA-DRB5 RING1 HLA-DRB6 MICB MIR6873 HLA-DPA1 PFDN6 TAP2 LY6G6D RGL2 EGFL8 VPS52 PSMB8 CUTA HLA-DMB MIR3135B BAG6 SNORD52 GPANK1 PBX2 TNXA MIR4646 VARS HLA-DQB2 RXRB SAPCD1 C4B PPP1R2P1 LY6G6C ZBTB9 SYNGAP1 PPT2
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LOC101929163 MSH5 DXO C6orf10 PPT2-EGFL8 TNXB PRRT1 HSPA1B C4A LOC100287329 SLC44A4 AGER ATP6V1G2-DDX39B LY6G5B SKIV2L NOTCH4 NEU1 HLA-B FKBPL HLA-DRA MCCD1 C2 PRRC2A MIR6833 C6orf47 C2-AS1 DDAH2 LY6G6F HCG23 ATF6B HSPA1L LTA RNF5 ABHD16A LY6G6E APOM NFKBIL1 LTB STK19 ZBTB12 MIR6891 CYP21A1P AIF1 BTNL2 ATP6V1G2 MSH5-SAPCD1 CFB C6orf25 LST1 AGPAT1 C6orf48 CLIC1 CSNK2B SNORD84 SNORD117 MIR6832 NELFE MICB LSM2 LOC100507547 VWA7 LY6G6D LY6G5C DDX39B EGFL8 SAPCD1-AS1 LOC102725068 HCG26 BAG6 DDX39B-AS1 NCR3 MICA HSPA1A SNORD52 GPANK1 PBX2 SNORD48 TNXA MIR4646 VARS TNF SAPCD1 C4B SNORA38 EHMT2 MIR1236 LY6G6C CYP21A2 MIR6721 GPSM3 HCP5 PPT2
nsv5247 Chr.6:31957962 - 32055439 on Build GRCh38 Deletion TNXA DXO STK19 SKIV2L TNXB CYP21A1P C4B C4A NELFE CYP21A2

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