Hs00481190_cn

• Gene Symbol: XKR5
• Assay Reference Genome Location: Chr.8:6815896 on build GRCh38
• Cytoband: 8p23.1

Target Gene Details

• Entrez Gene ID: 389610
• Gene Name: XK related 5
• Gene Aliases: HARL2754, UNQ2754, XRG5A, XRG5BM
• Location: Chr.8:6808517-6835644 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
XKR5	NM_001289973.1			NP_001276902.1
	NM_207411.4			NP_997294.3
	XM_011534750.2			XP_011533052.1
	XM_017013401.1			XP_016868890.1
	XM_017013402.1			XP_016868891.1
	AY358489.1			AAQ88853.1
	AY534242.1			AAT07091.1
	AY534243.1			AAT07092.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1021684	Chr.8:6492570 - 6951933 on Build GRCh38	Loss	XKR5 MCPH1 MIR4659B AGPAT5 DEFB1 DEFA6 DEFA8P MCPH1-AS1 MIR8055 ANGPT2 MIR4659A DEFA4 GS1-24F4.2
nsv610004	Chr.8:6544845 - 6915391 on Build GRCh38	Gain	XKR5 MCPH1 MIR4659B MCPH1-AS1 MIR8055 ANGPT2 AGPAT5 MIR4659A GS1-24F4.2 DEFB1
nsv1025976	Chr.8:6615427 - 6829450 on Build GRCh38	Loss	XKR5 MCPH1 MIR4659B MCPH1-AS1 MIR8055 AGPAT5 MIR4659A
esv3576520	Chr.8:6794391 - 7186524 on Build GRCh38	Gain	XKR5 DEFA9P DEFA3 DEFA1 DEFA1B DEFA10P DEFA11P DEFB1 DEFA6 DEFA7P DEFT1P2 DEFA8P DEFA5 DEFA4 GS1-24F4.2 DEFT1P
esv2422383	Chr.8:6504868 - 6924071 on Build GRCh38	Duplication	XKR5 MCPH1 MIR4659B MCPH1-AS1 MIR8055 ANGPT2 AGPAT5 MIR4659A GS1-24F4.2 DEFB1
nsv831220	Chr.8:6670324 - 6870969 on Build GRCh38	Gain	XKR5 MIR4659B MCPH1-AS1 AGPAT5 MIR4659A GS1-24F4.2 DEFB1
nsv610006	Chr.8:6710680 - 7063882 on Build GRCh38	Gain	XKR5 MIR4659B DEFA9P DEFA3 DEFA1 DEFA1B DEFA10P AGPAT5 DEFA11P DEFB1 DEFA6 DEFA7P DEFT1P2 DEFA8P DEFA5 MIR4659A DEFA4 GS1-24F4.2 DEFT1P
nsv1031577	Chr.8:6712833 - 8008628 on Build GRCh38	Gain	DEFB105B DEFB107B FAM66E ZNF705G USP17L3 AGPAT5 LOC101929400 DEFA11P LOC101928095 DEFB1 DEFA7P DEFB105A DEFT1P2 LOC107986910 DEFA5 DEFB104B OR7E125P DEFB109P1B FAM90A7P GS1-24F4.2 LINC00965 USP17L1 DEFB4B DEFA1B DEFA10P DEFB106A ZNF705B DEFB107A DEFA8P USP17L8 DEFB103B SPAG11A MIR4659A DEFA4 DEFT1P DEFB104A XKR5 DEFA9P DEFA1 DEFA6 PRR23D2 FAM90A10P USP17L4 MIR4659B FAM66B DEFA3 PRR23D1 OR7E154P SPAG11B DEFB4A DEFB103A DEFB108P1 DEFB106B
nsv465437	Chr.8:6797870 - 6971563 on Build GRCh38	Gain	DEFA8P XKR5 DEFA9P DEFA10P DEFA4 GS1-24F4.2 DEFB1 DEFA6
esv2752262	Chr.8:6781378 - 7153553 on Build GRCh38	Gain	XKR5 DEFA9P DEFA3 DEFA1 DEFA1B DEFA10P DEFA11P DEFB1 DEFA6 DEFA7P DEFT1P2 DEFA8P DEFA5 DEFA4 GS1-24F4.2 DEFT1P

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation