Hs00482224_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48044016 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	1	39	NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1	1	39
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1 BSPH1 C19orf68 LIG1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	FAM83E GYS1 CCDC114 ATF5 TEAD2 SEC1P TSKS SLC6A16 RPL18 MIR4751 SNAR-A3 IZUMO1 TMEM143 AKT1S1 BCL2L12 BCAT2 FLT3LG GRWD1 SYNGR4 CCDC155 CYTH2 CGB3 PLEKHA4 DKKL1 MIR150 CARD8-AS1 SNAR-A5 C19orf73 KCNJ14 MIR6800 MAMSTR SNORD33 PTOV1-AS1 FUT1 SNAR-A13 RASIP1 CARD8 EMP3 RUVBL2 PRRG2 SNAR-B2 MIR5088 FLJ26850 MIR6799 LIG1 PPFIA3 MIR4324 PLA2G4C IRF3 DBP PPP1R15A MIR4750 CGB7 SNRNP70 SNAR-C5 KDELR1 C19orf68 SNAR-G2 CGB8 FUZ KCNA7 SCAF1 SIGLEC11 SPHK2 LOC101928295 SNAR-A12 CGB5 SNAR-C4 NUP62 NUCB1-AS1 RPL13A SNORD35B AP2A1 BSPH1 SNAR-A11 VRK3 LIN7B FGF21 RPS11 LOC101059948 NTN5 CGB1 LHB SNAR-C2 SNAR-A6 HRC FCGRT SIGLEC16 MED25 TULP2 LMTK3 HSD17B14 SNORD35A TRPM4 NUCB1 SULT2B1 PLA2G4C-AS1 GFY PIH1D1 SNORD34 SNAR-A10 LOC100287477 SNAR-B1 RCN3 CPT1C TBC1D17 SLC17A7 CD37 BAX SNAR-D CA11 NOSIP PRMT1 SNAR-C3 FUT2 SNAR-A7 SNAR-G1 PTOV1 SNAR-A9 ALDH16A1 ZNF473 SNAR-C1 SNAR-A4 CGB2 SNAR-A1 SNORD32A IL4I1 CABP5 MIR6798 SNAR-A14 LOC105372430 PTH2 ZNF114 GRIN2D PTOV1-AS2 SPACA4 RRAS DHDH MIR4749 ELSPBP1 PNKP SNAR-A2 ADM5 FTL LOC105447645 PRR12 NTF4 SNAR-A8
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	ZNF114 GRIN2D CARD8-AS1 CCDC114 PLA2G4C-AS1 LIG1 ELSPBP1 TMEM143 PLA2G4C CABP5 CARD8 KDELR1 EMP3 SYNGR4 C19orf68
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
esv2619667	Chr.19:48043334 - 48044098 on Build GRCh38	Insertion	CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	LINC01595 TPRX1 PLA2G4C-AS1 SNAR-C1 SNAR-A1 SNAR-A3 SNAR-A12 ELSPBP1 SNAR-C2 PLA2G4C SULT2A1 CRX SNAR-C4 SNAR-A2 CABP5 SNAR-A13 SNAR-C5 BSPH1 SNAR-C3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding