Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 10849 |
Gene Name: | CD3e molecule associated protein |
Gene Aliases: |
ASE-1, ASE1, CAST, PAF49 |
Location: |
Chr.19:45406129-45410766 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CD3EAP | NM_001297590.1 | 3 | 899 | NP_001284519.1 |
| NM_012099.1 | 3 | 893 | NP_036231.1 | |
| XM_017026180.1 | 3 | 994 | XP_016881669.1 | |
| XM_017026181.1 | 3 | 1064 | XP_016881670.1 | |
| AF017633.1 | 3 | 417 | AAD41158.1 | |
| AK292183.1 | 3 | 458 | ||
| BC009705.1 | 3 | 450 | ||
| BC038992.1 | 3 | 421 | AAH38992.1 | |
| BC046141.1 | 3 | 693 | ||
| BC054044.1 | 3 | 769 | AAH54044.1 | |
| BC108889.2 | 3 | 658 | AAI08890.1 | |
| BU166593.1 | 3 | 768 | ||
| U86751.1 | 3 | 893 | AAB68608.1 |
Target Gene Details
Entrez Gene ID: | 2067 |
Gene Name: | ERCC excision repair 1, endonuclease non-catalytic subunit |
Gene Aliases: |
COFS4, RAD10, UV20 |
Location: |
Chr.19:45407333-45478866 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ERCC1 | NM_001166049.1 | 9 | 2270 | NP_001159521.1 |
| NM_001983.3 | 10 | 2342 | NP_001974.1 | |
| XM_017026460.1 | 10 | 2743 | XP_016881949.1 | |
| XM_017026461.1 | 11 | 2372 | XP_016881950.1 | |
| XM_017026462.1 | 11 | 2337 | XP_016881951.1 | |
| XM_017026463.1 | 10 | 2329 | XP_016881952.1 | |
| XM_017026464.1 | 10 | 2330 | XP_016881953.1 | |
| XM_017026465.1 | 9 | 2671 | XP_016881954.1 | |
| XM_017026466.1 | 10 | 2305 | XP_016881955.1 | |
| AK092039.1 | 9 | 2080 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833845 | Chr.19:45308814 - 45457371 on Build GRCh38 | Loss |
 ERCC1
CD3EAP
MIR6088
ERCC2
KLC3
PPP1R13L
CKM
|
| nsv833846 | Chr.19:45381005 - 45469089 on Build GRCh38 | Loss |
ERCC1
CD3EAP
MIR6088
FOSB
PPP1R13L
|
| nsv458711 | Chr.19:45323108 - 45408744 on Build GRCh38 | Gain |
ERCC1
CD3EAP
ERCC2
KLC3
PPP1R13L
|
| nsv428365 | Chr.19:45358027 - 45469089 on Build GRCh38 | Gain+Loss |
ERCC1
CD3EAP
MIR6088
ERCC2
FOSB
PPP1R13L
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top