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See other PCYT1A CNV Assays ›
Gene Symbol
PCYT1A
Assay Reference Genome
Location

Chr.3:196238406 on build GRCh38
Cytoband
3q29
Assay ID Hs00496803_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5130

Gene Name:

 phosphate cytidylyltransferase 1, choline, alpha

Gene Aliases:

 CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD

Location:

 Chr.3:196237745-196287752 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCYT1A NM_001312673.1 9 1534 NP_001299602.1
NM_005017.3 10 1598 NP_005008.2
AK304534.1 9 1391
BC046355.1 AAH46355.1
DB223595.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3599278 Chr.3:196229547 - 196249176 on Build GRCh38 Gain PCYT1A SLC51A
nsv997797 Chr.3:195931489 - 196486087 on Build GRCh38 Gain TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 TCTEX1D2 TFRC LINC00885 UBXN7-AS1 TM4SF19 UBXN7 PCYT1A RNF168 SDHAP1 SLC51A LOC105374301
esv3599276 Chr.3:196227560 - 196295937 on Build GRCh38 Loss PCYT1A TCTEX1D2 SLC51A
nsv1009811 Chr.3:196124925 - 196411200 on Build GRCh38 Gain PCYT1A TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 TCTEX1D2 LINC00885 SLC51A TM4SF19 UBXN7
nsv593071 Chr.3:196132016 - 196345571 on Build GRCh38 Gain PCYT1A TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 TCTEX1D2 LINC00885 SLC51A TM4SF19
nsv1008512 Chr.3:195982791 - 196248065 on Build GRCh38 Gain PCYT1A ZDHHC19 TFRC LINC00885 SDHAP1 SLC51A LOC105374301
esv2759213 Chr.3:195382058 - 196344722 on Build GRCh38 Gain+Loss TM4SF19-TCTEX1D2 TM4SF19-AS1 MIR6829 SDHAP2 ZDHHC19 TCTEX1D2 LOC105374297 TFRC LINC00885 MUC20 TM4SF19 LINC00969 PCYT1A LOC105374299 ACAP2 APOD TNK2 LOC101929697 SDHAP1 PPP1R2 MIR570 SLC51A LOC105374301 MUC4

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